Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g1680 ATGGCTGGTCTTGATTTAGGCACTGCTTCTCGCTTTGTCCCAAATCTTCACCACAGACCCGACCTACACCTTCAACAACACCAATCTCACCAACAACAACATCAACAACACCACGACTCCGACGACGACGGAAACCGGGCAGCTGCCGCCCAGTTTGACGGCCCCCACCAAGGCCTGGAGCTTGCCTCCGCCTCAGCGGGGGCCGGGGACATAGTGGCCCGGCGTCCACGTGGCAGGCCTCCAGGCTCAAAGAACAAGCCCAAACCCCCAGTGATCATCACAAGGGAAAGCGCCAACACCCTACGCGCCCACATTCTAGAAGTTTCCGCCGGCTCCGACGTGTTCGACGCCGTCGCCACCTACGCGCGGCGGCGCCAGCGTGGCATATGCATCCTCAGCGGCAGCGGCTCCGTCACCAACGTCACCCTACGTCAGCCGGCCGCCGCCGGGGCCGTGGTGACACTTCATGGAAGGTTCGAGATTTTGTCGCTTTCAGGGTCGTTCCTGCCGCCGCCTGCACCGCCGGGCGCGACGAGCCTGACGGTGTATTTGGGCGGAGGACAAGGGCAGGTTGTCGGAGGGAATGTTGTGGGAGAATTGACGGCGGCGGGGCCTGTTATGGTGATTGCTTCTTCGTTTACTAATGTTGCTTATGAGAGGTTGCCGTTGGATGAGCATGAGGAGGAGCAACTTCAGATGCAGCCGCCTCCCCCGGCGGGTTTTCCGGACACGTCGTCGGGTTTGCCGTTTTTTAATTTGCCGGCGAATATGCAGATTCCGGTGGAAGGTTGGGGTGGGAATTCATCAGGGCCTCGTCCTCCATTTTGA 828 0.6014 MAGLDLGTASRFVPNLHHRPDLHLQQHQSHQQQHQQHHDSDDDGNRAAAAQFDGPHQGLELASASAGAGDIVARRPRGRPPGSKNKPKPPVIITRESANTLRAHILEVSAGSDVFDAVATYARRRQRGICILSGSGSVTNVTLRQPAAAGAVVTLHGRFEILSLSGSFLPPPAPPGATSLTVYLGGGQGQVVGGNVVGELTAAGPVMVIASSFTNVAYERLPLDEHEEEQLQMQPPPPAGFPDTSSGLPFFNLPANMQIPVEGWGGNSSGPRPPF 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g1680 275 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 27 232 IPR014476 GO:0003680
Mibi12g1680 275 Gene3D - 101 235 - -
Mibi12g1680 275 SUPERFAMILY AF0104/ALDC/Ptd012-like 98 232 - -
Mibi12g1680 275 MobiDBLite consensus disorder prediction 23 50 - -
Mibi12g1680 275 MobiDBLite consensus disorder prediction 32 46 - -
Mibi12g1680 275 MobiDBLite consensus disorder prediction 65 91 - -
Mibi12g1680 275 CDD DUF296 102 177 IPR005175 -
Mibi12g1680 275 Pfam Plants and Prokaryotes Conserved (PCC) domain 102 215 IPR005175 -
Mibi12g1680 275 ProSiteProfiles PPC domain profile profile. 98 234 IPR005175 -
Mibi12g1680 275 FunFam AT-hook motif nuclear-localized protein 101 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g1680 Mibi-ChrMibi12 32888568 32889395 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g1680 1 275 AT-hook Motif Nuclear Localized (AHL) Family AT4G17800 64.000 9.38e-99 289