Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g1678 ATGGATCCTCGGCAATGGCTGCGGCCACCTCTCAATATGCCTGTTCCTCCTCCTCCAAATTCGTCCAATTCTTCCTCTGTTGACCTCAATTTCTCCCCCAAGGACATGTCCCCTCCACCACAACACCATCCTCCTCCTCCTCCTCCTGTTCCGCTTCCCCAACCAGTAGGAACCATTTCTCTTAACCAAGGTCCCTCCTCTGCTTTGAGGCCCCTCAAGAGAAAGAGAGGCCGTCCCAGGAAACATGCTCCCATTGTTACAGATCCCAGGGGGAGGCCCCCCGGCGCTCAAAATAAGCATACAAAGCCCTCGCTTAATCTTCGTATCACTCTTCCTTTCTTCCATCCTTCTTTTACTTCCCCCTTCTTTTTATGTGGATCTGATTCAGATTTCTTGTCTGTTTCTATCATTACCAGGAATTTCCGGGGGCTCATTTACTCCACATATCATCTTGTTGCAACCTGGGGAGCAAAGGTTTGGTCCTTTTGTGAAGAAGGGTCACGTTCAAGTTCAGTGAGCATTATTTCTGCTAATGGTACACTCAGCATGGCCCATATTCGACCACTGACTTCGGCTGGTGGTACAGTGAAATTAGAGGGTCAATATACGCTTTCAAGTTTATCAGTGACTTGCTCTCCATCTGAAGACGGTGGTCATAGAACAAGCGGTTTATCTATCACTCTTGTGAGGGATGATGGAAGTATTGTGGCTGGTAGTGTTTCTGGAAGGCTAATTGCAGCATCACAGATACAGCTCATTATGGGTACCTACCGTATGGACGGGAACCAAAAGTCGATGTCAAAGGGGAAATCGGGGCCTTCCTCGTTAGCAACGCCCCAGAATGCACCATCTGTGACACCAACCAGTGCCACGTCTCATGGGGCTTCAAGTCGTTCTTTTTCTTATGTTGATCTGCATGGTCCTAAGAATAGAACTAAATCTAGGTCTTGGGATGAAACTCGATCTGAGCCTGGATTCAACAGTAGTATCAGGCATTAG 999 0.4795 MDPRQWLRPPLNMPVPPPPNSSNSSSVDLNFSPKDMSPPPQHHPPPPPPVPLPQPVGTISLNQGPSSALRPLKRKRGRPRKHAPIVTDPRGRPPGAQNKHTKPSLNLRITLPFFHPSFTSPFFLCGSDSDFLSVSIITRNFRGLIYSTYHLVATWGAKVWSFCEEGSRSSSVSIISANGTLSMAHIRPLTSAGGTVKLEGQYTLSSLSVTCSPSEDGGHRTSGLSITLVRDDGSIVAGSVSGRLIAASQIQLIMGTYRMDGNQKSMSKGKSGPSSLATPQNAPSVTPTSATSHGASSRSFSYVDLHGPKNRTKSRSWDETRSEPGFNSSIRH 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g1678 332 SUPERFAMILY AF0104/ALDC/Ptd012-like 159 257 - -
Mibi12g1678 332 MobiDBLite consensus disorder prediction 37 55 - -
Mibi12g1678 332 Gene3D - 155 270 - -
Mibi12g1678 332 MobiDBLite consensus disorder prediction 261 332 - -
Mibi12g1678 332 MobiDBLite consensus disorder prediction 1 102 - -
Mibi12g1678 332 ProSiteProfiles PPC domain profile profile. 134 279 IPR005175 -
Mibi12g1678 332 MobiDBLite consensus disorder prediction 261 299 - -
Mibi12g1678 332 Pfam Plants and Prokaryotes Conserved (PCC) domain 159 256 IPR005175 -
Mibi12g1678 332 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 157 296 IPR039605 GO:0003680
Mibi12g1678 332 SMART AT_hook_2 87 99 IPR017956 GO:0003677
Mibi12g1678 332 SMART AT_hook_2 73 85 IPR017956 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g1678 Mibi-ChrMibi12 32875646 32879163 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g1678 34 317 AT-hook Motif Nuclear Localized (AHL) Family AT2G33620 29.179 5.60e-21 90.5