Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g1677 ATGGATCCTCGGCAATGGCTACGCCCACGGCCGCCGCAACATCCGCCGGCGCCACCTCTCAATACGCCTATTCCTCCTTCTCCTCCCAATTCCTTCGATTCTTCCTCTATTGACCTCAATTCCTCCCCCAAGGCCACGTCCCCTCCTCCTGTTCCCCTTCCCCCACCTGTAGGAATCGATTCTCTTCACGAAGGTCCCTCCTCTGCGTTGAGGCCCCTCAAGAGAAAGAGAGGCCGTCCCAGGAAACATGCTCCCATTGACGTTGCCGCAAAGATTTGGTCCTTTTCTGAAGGGCCACATTCACGTTCAGTGACTATTCTTGATGCTGATGGTACTGTCAGCATGGCCCAAATTCGAGTGCTAACTTCGGCTGGTGGTACAACGCACTTAGACTTAGAGGGTCTATATATGATTTTAAGTCTAGAAGGAATTTGCTTTCCATCTGAAGACGGTGGTTATGGAAGAGGTGGTCTAGCTGTCTCTCTTAAGGGGAGTGATGGACATATTGTGGGTGGTGGAGTTTCTGGAAAGCTAATTGCAGCATCACAAATACAGCTCGTTTTGGGTACTTTTCATGTGGATTGGAACCAAAAGCCGAAGTCAAAGGGTAAATCGGGGCCTTCCTCATCAGCAACGCCCCAGAATGCCCCAATATCTGTGACTTTAACAAATGCTACCTCTCATGGGGCTTCAAGTCGTTCTTCTTCTTATGTTGCTTTGCATGGTCCTGGGGATGGAACTGAATCTGGGTCTGGGGATGAAAATGGGTCTTAG 774 0.5013 MDPRQWLRPRPPQHPPAPPLNTPIPPSPPNSFDSSSIDLNSSPKATSPPPVPLPPPVGIDSLHEGPSSALRPLKRKRGRPRKHAPIDVAAKIWSFSEGPHSRSVTILDADGTVSMAQIRVLTSAGGTTHLDLEGLYMILSLEGICFPSEDGGYGRGGLAVSLKGSDGHIVGGGVSGKLIAASQIQLVLGTFHVDWNQKPKSKGKSGPSSSATPQNAPISVTLTNATSHGASSRSSSYVALHGPGDGTESGSGDENGS 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g1677 257 ProSiteProfiles PPC domain profile profile. 70 213 IPR005175 -
Mibi12g1677 257 MobiDBLite consensus disorder prediction 1 83 - -
Mibi12g1677 257 MobiDBLite consensus disorder prediction 201 238 - -
Mibi12g1677 257 SUPERFAMILY AF0104/ALDC/Ptd012-like 87 192 - -
Mibi12g1677 257 MobiDBLite consensus disorder prediction 197 257 - -
Mibi12g1677 257 CDD DUF296 87 191 IPR005175 -
Mibi12g1677 257 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 87 234 IPR039605 GO:0003680
Mibi12g1677 257 Gene3D - 85 205 - -
Mibi12g1677 257 MobiDBLite consensus disorder prediction 45 59 - -
Mibi12g1677 257 Pfam Plants and Prokaryotes Conserved (PCC) domain 87 192 IPR005175 -
Mibi12g1677 257 MobiDBLite consensus disorder prediction 8 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g1677 Mibi-ChrMibi12 32860554 32863390 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g1677 87 232 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 43.506 1.22e-20 87.8