Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g1676 ATGGATCCTGGGGACCCATGGCTATGGCCACCCTCACAACCACAACATCCACCTCTCAATTCCTTCAATTCTTCCTCTGCTATCCCCAATTACCACCACCAACCTCCCTCCTCCTCCGCCGATTTTCCCTTCCTCCATTCTGCAGTACAATACCTCCCTCCTCCTCCTCCTCCTGTTCCGCTTCCCCAGCCTGTAGGAACCAATGCTCTGAACCAAGGTTCCTCCTCTGCGTTCATTCCCTGCGAGAGAAAGAGAGGCCGTCCCAGGAAACACGCGCTTGTTGATCCACCTCCTAAAACGCCCGGTTTTAAAAGAGTTTTTACTCCACATAGGATCTTGTTGGAAGCTGGGGAGGGTCTATTTACGATTTTATGTCTACAAGGAACTTGCTCTCCATCTAAAGACGGTGGTTATGGAACAAGTGGTCTAACTATCACTCTTATGGGGAATGATGGAAGTATTGCGGGTGGTAGTGTTTCTGGAAAACTAATTGCAGCGTCACAAATACAGCTTGTTTTGGGTTCCTATCGTATGGGTGGGAACCAAAAATCGAGGTCAAAGGGGAAATCGGGGCCTTCCTCATCAGCGTTGCCCACGAATGCACCACCACATGTGACTGCAACCAGTGCTACGTCTCACGGGGCTTCAAGTCATTCTTCTTCTTATGTTGATCCGCATGGTCCTGGGAATGGAATTGAATCTGGGTCTGTGGATGGGATTGGGTCTTAG 729 0.4979 MDPGDPWLWPPSQPQHPPLNSFNSSSAIPNYHHQPPSSSADFPFLHSAVQYLPPPPPPVPLPQPVGTNALNQGSSSAFIPCERKRGRPRKHALVDPPPKTPGFKRVFTPHRILLEAGEGLFTILCLQGTCSPSKDGGYGTSGLTITLMGNDGSIAGGSVSGKLIAASQIQLVLGSYRMGGNQKSRSKGKSGPSSSALPTNAPPHVTATSATSHGASSHSSSYVDPHGPGNGIESGSVDGIGS 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g1676 242 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 118 220 IPR039605 GO:0003680
Mibi12g1676 242 MobiDBLite consensus disorder prediction 1 17 - -
Mibi12g1676 242 MobiDBLite consensus disorder prediction 18 42 - -
Mibi12g1676 242 MobiDBLite consensus disorder prediction 179 242 - -
Mibi12g1676 242 Gene3D - 99 189 - -
Mibi12g1676 242 MobiDBLite consensus disorder prediction 179 224 - -
Mibi12g1676 242 Pfam Plants and Prokaryotes Conserved (PCC) domain 117 175 IPR005175 -
Mibi12g1676 242 SUPERFAMILY AF0104/ALDC/Ptd012-like 117 176 - -
Mibi12g1676 242 MobiDBLite consensus disorder prediction 1 42 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g1676 Mibi-ChrMibi12 32853863 32857592 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g1676 118 220 AT-hook Motif Nuclear Localized (AHL) Family AT2G33620 41.667 6.79e-10 56.6