Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g1669 ATGCCGTCTCAGTATCTCATTGCTCTGTTCTCTCGCTGCTGCAAGCTCGGAGCACACTTCGATTCAATGGGTTGCTCTGGAAAGGAAAAACATATCCGGGTAAATCGAAAGTCTCAATCTTTCAAGCAAGATAATTGTTGTCTTCATAGATTTTCAATTTCCAAATCTATTATGGAATCAGGCCTCTGGCCGCTTAAATACCCTCTGGGTCTCAACGATTCGACTCAAAGCTCGAATCCTGATTCCGACCCTAACATTAAACTTATACCTAATAGCGAGGAATGTGGCTGGAGTTACTGCAGTGAAGAGCACTTGGAAGAAATTCTATTGAAAAACTTGGAGTGTTTGTACAAGGAAGCTGTATCGAAGCTTGTTATATTGGGGTATGATGAGGACACTGCTTTGAAAGCGGTGTTGCGAAATGGGCATTGTTATCATGGTGGGACGGATTTGCTGACCAATATATTGCATAACTCATTGGCTTATTTAAATAATGATGGTGGTGGTGATAGTACATGTAAAGATAATTTGGATGATTCGGAACCGGTCTTCGCAGACTTGAGGGAGTTGGAGGAGTACTCTCTGGCAGTTATGGTCTGTCTCTTGCAGCATTTAAGGCCTCATTTGAGTAAAGGTGATGCCATGTGGTGCTTACTTATGAGTGATCTTCATGTTGGAAAGGCAAACAAAATGGAAATCCCCATGCTTCCTGAGCCAGGCGATGGTAATCCTGCTTCTTCTACAGTTGAAACTGTTAGCAAGTCGGCCCCATCCCTTTGTAGGTTTCATGGGAGTTGGACATTTGCAAATAATGGAGACTCAGATTTCCCTGCAAATGGATTATTTTCTTGTGTTGCAGACATGACCTTACGGAGAGATATTGAATTCCCAAAGCATTTTAATCTCTCTCCTTCTTTGAAGTCTTTGTTGAAAAGAAATGTGGCAGTGTTTGCTGCTGGTTTAAGGGCAAACTCAAAACAATTACAGACAAAAGCAAAAGCGTGGCCTGGTAGTAGTTCTTCATCTACTTTGGATCCTCCTCCTGTACAGGAGACTAAACCTCCAGTTGAGAATGAGAAGGCAGGAGATTCTCAGAATGAAAATAACCAAGATGCTGTGAATTCGGTTCTCAGTAGATTTCATGATCTAAATTTTGATGAGAATTTGGAGTCTCTGGCAGACGATCAGAAGGATGAGATGGCTTCCACTATACTTCATCATATCAATGATCTTGAGAAACAGTTACAGGAGCGGAAAGATTGGGCTCATCAGAAGGCAATGCAAGCTGCAAAAAAACTAAGCAGTGATCTGACTGAGCTGAAAATGCTAAGGATGGAAAGAGAAGAGGCTCAGAGATTGAAGGAAGGGAAACAGGCCCTTGAGGACACAACTATGAAAAGACTTTCAGAGATGGAGATTGCACTGAGAAAGGCTAGCGGTCAAGTGGACCGTGCCAATGCAGCTGTGAGGAAACTTGAAACTGAAAATGCAGAGATCAAAGCAGAGATGGAGGCTTCTAAATTGAGTGCTTCAGAGTCGGTCTCAGCTTGCTTGCAAGTTGCAAAGAGAGAGAGAAAGTGCTTGAAGAGGCTTCTGGCTTGGGAAAAACAGAAAGCTAAGCTGCAGGAGGAGATTTCCGAAGAGAAAGATAAGATATTGGAGATGCGAAAAATGTTTAGTTGGATTAAACAATGTCAGAAAGAAGCCGAGATCAAGTGGAGGGAGGAGTTGAAGGCTAAAGAGGATGCCTTAACACTGTTTAAGGAGGAAAAGCGGTTGAAGGAAGAAGTGGAGGCTAATAATAAGAGGAAGCTTGAGGCTTTGCGGCTAAAGACAGATATAGATTTCCAGCGTCATAAGGATGATTTCCTCAGACTTGAACAGGAACTCTCACGTCTTAAAGCATCTGATCAGCCAGCTAAGTTGCATCATCACCAACCAAATACTTCACCTGCATGTGAGTCTGAAGAAGCAAAGCCCCAAAGAGAGACAATTGCAAAACTGCTTCAAGAATTAGATAAATTGGAGGAAATTTCCAAGAAAGAAGACAACTTTGATAGGGAATGCATTATATGTAGGGAAGATGAAGTGTCTGTTGTGTTCTTGCCGTGTGCACATCAAGTGATGTGTAGTAAGTGCAGTGATGAGTATGGGAGAAGCGGCAATTCTGTTTGTCCTTGCTGCCATGTTTCAATCGAACGGATGATTCGTGTATTTGGGCCAACTTCTTAG 2232 0.4252 MPSQYLIALFSRCCKLGAHFDSMGCSGKEKHIRVNRKSQSFKQDNCCLHRFSISKSIMESGLWPLKYPLGLNDSTQSSNPDSDPNIKLIPNSEECGWSYCSEEHLEEILLKNLECLYKEAVSKLVILGYDEDTALKAVLRNGHCYHGGTDLLTNILHNSLAYLNNDGGGDSTCKDNLDDSEPVFADLRELEEYSLAVMVCLLQHLRPHLSKGDAMWCLLMSDLHVGKANKMEIPMLPEPGDGNPASSTVETVSKSAPSLCRFHGSWTFANNGDSDFPANGLFSCVADMTLRRDIEFPKHFNLSPSLKSLLKRNVAVFAAGLRANSKQLQTKAKAWPGSSSSSTLDPPPVQETKPPVENEKAGDSQNENNQDAVNSVLSRFHDLNFDENLESLADDQKDEMASTILHHINDLEKQLQERKDWAHQKAMQAAKKLSSDLTELKMLRMEREEAQRLKEGKQALEDTTMKRLSEMEIALRKASGQVDRANAAVRKLETENAEIKAEMEASKLSASESVSACLQVAKRERKCLKRLLAWEKQKAKLQEEISEEKDKILEMRKMFSWIKQCQKEAEIKWREELKAKEDALTLFKEEKRLKEEVEANNKRKLEALRLKTDIDFQRHKDDFLRLEQELSRLKASDQPAKLHHHQPNTSPACESEEAKPQRETIAKLLQELDKLEEISKKEDNFDRECIICREDEVSVVFLPCAHQVMCSKCSDEYGRSGNSVCPCCHVSIERMIRVFGPTS 743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g1669 743 Pfam Family of unknown function (DUF6592) 112 230 IPR046527 -
Mibi12g1669 743 SMART ring_2 689 728 IPR001841 -
Mibi12g1669 743 MobiDBLite consensus disorder prediction 329 347 - -
Mibi12g1669 743 MobiDBLite consensus disorder prediction 635 659 - -
Mibi12g1669 743 Pfam Zinc finger, C3HC4 type (RING finger) 686 734 - -
Mibi12g1669 743 PANTHER OS05G0141500 PROTEIN 22 738 IPR046934 -
Mibi12g1669 743 Coils Coil 531 558 - -
Mibi12g1669 743 MobiDBLite consensus disorder prediction 329 369 - -
Mibi12g1669 743 SUPERFAMILY RING/U-box 673 735 - -
Mibi12g1669 743 Coils Coil 616 636 - -
Mibi12g1669 743 ProSiteProfiles Zinc finger RING-type profile. 689 729 IPR001841 -
Mibi12g1669 743 Coils Coil 468 509 - -
Mibi12g1669 743 Coils Coil 587 607 - -
Mibi12g1669 743 Coils Coil 440 463 - -
Mibi12g1669 743 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 663 740 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g1669 Mibi-ChrMibi12 32780058 32783451 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g1669 663 739 C3H Transcription Factor Family AT1G73950 34.524 2.82e-06 48.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi12g1669 12 32780058 32783451 Mibi10g0335 10 5424067 5428482 CCT