Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g1667 ATGGGAGGTGCGTCACTGCCACCAGGCTTTCGATTCCACCCAACTGATGAAGAACTTGTGGGATATTACCTGAAAAGGAAAGTTGAGGGGCTGGAAATTGAGCTTGAAGTTATACCAGTCATTGATCTTTACAAATGTGACCCCTGGGAGTTACCTGAGAAATCATTCCTTCCAAAGAGAGATATGGAATGGTTTTTCTTCTGTCCTAGAGATCGAAAATATCCAAATGGATCAAGAACAAACAGGGCAACCAAAGCTGGATACTGGAAAGCCACAGGAAAAGACAGAAAAGTTGTATGCCACTCTTCTTCTTCCTCTGTCACTGGTTACCGGAAAACTCTGGTTTTCTACTGTGGAAGAGCTCCTTTAGGAGATCGAACCAACTGGGTCATGCACGAATATCGCCTTTGTGATGATCTTGCCTCAGGATCACCAAGCTTTCAGGGTGCTTATGCTCTGTGCCGAGTGATTAAGAAGAACGAGAAACCAAATGATTTGAAGGGAGAAGAACACAAGGGTAAACAAGCTGTTCATGGGAATGATACTTCAATGAGAACCTCAAATGAGACTTTTAATATCTCTGGTGGTGATGTTTCTTCACAAACAAGTCATCTGTACAATGAGAGTGGCCATTCTAGCCCAATTACTTCTCCTTCCAATGCTGTTCAGATGGAAGAGTTCGAGCAAGCTTCCACAGAGAAGAATCCTTCAGATATCTGGATCTCTCCAGATTTTATTCTTGATTCTTCAAAGGATTATCCTGAAGTCCAACATGCAGTGTCTGAATACTTTCCACAGTATGACTTATCAAGCTCAATGATCCCATGGCAGCCAATGGAACAACACACAGAAATTTCACCCTCTTCATCCTACTCAAATTTGAATGGGGAAGTCGAATTTGCTGGTGATCTAAATATGTCAACCTACATGGAACAAGCAAATTTCATGAACTTTTATGAAAATGATTCTATGCCCTATGGAGGTTTTGATCAGATCAACTCAATCACCTATCCGAGACATTTCTGA 1026 0.4172 MGGASLPPGFRFHPTDEELVGYYLKRKVEGLEIELEVIPVIDLYKCDPWELPEKSFLPKRDMEWFFFCPRDRKYPNGSRTNRATKAGYWKATGKDRKVVCHSSSSSVTGYRKTLVFYCGRAPLGDRTNWVMHEYRLCDDLASGSPSFQGAYALCRVIKKNEKPNDLKGEEHKGKQAVHGNDTSMRTSNETFNISGGDVSSQTSHLYNESGHSSPITSPSNAVQMEEFEQASTEKNPSDIWISPDFILDSSKDYPEVQHAVSEYFPQYDLSSSMIPWQPMEQHTEISPSSSYSNLNGEVEFAGDLNMSTYMEQANFMNFYENDSMPYGGFDQINSITYPRHF 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g1667 341 ProSiteProfiles NAC domain profile. 6 159 IPR003441 GO:0003677|GO:0006355
Mibi12g1667 341 MobiDBLite consensus disorder prediction 164 218 - -
Mibi12g1667 341 SUPERFAMILY NAC domain 4 159 IPR036093 GO:0003677|GO:0006355
Mibi12g1667 341 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 5 228 - -
Mibi12g1667 341 MobiDBLite consensus disorder prediction 164 178 - -
Mibi12g1667 341 Gene3D NAC domain 15 165 IPR036093 GO:0003677|GO:0006355
Mibi12g1667 341 MobiDBLite consensus disorder prediction 179 218 - -
Mibi12g1667 341 FunFam Nac domain-containing protein 86 15 162 - -
Mibi12g1667 341 Pfam No apical meristem (NAM) protein 7 136 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g1667 Mibi-ChrMibi12 32753092 32754583 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g1667 1 333 NAC Transcription Factor Family AT4G17980 54.896 5.56e-116 336
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mibi12g1667 NAM 3.2e-39 No_clan