Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g1652 ATGCTGATTCTGTCTCAGATCATGCCTTCATTTTTCTTTCTCTTGCTGATTCTGTTTTGCTTTTGGGCTGAGAACGATGCCAAACCAGCTATGGTTTGTACTGCCAATGATTTACAAAGCTGGAAAGATTTTCCCAAGGGACTTAGGGTTCTTCTACTTGATGGGGACACCAATTCTGCTTCCGATATAAGAGTTAAGCTCGAGGCTATGGACTATATTGTTTCTATATTCTGCCATGAGAATGAAGCCTTGTCAGCAATCTCAAGCAAACCTGATGGCTTCCATGTTGCCATTGTGGAGGTTAGTACAAGCAATGACCAGGGATGTTTCAAATTTCTTGAGAATGCCAAGGACTTGCCAACCATTATGACTTCAAACGACCATTGCCTCAGCACCATGATGAAGTGTATAGCACTTGGTGCAGTTGAGTTCCTAAGGAAACCACTCTCTGAGGAAAAGCTCAGAAATATCTGGCAGCATGTGGTTCACAAGGCATTTAATGCTGGGGCAACTGTCCTGCCTGAATCGCTGAAACCTGTCAAAGAATCTGTAGTATCGATGTTGCGGCTCCAAACAGACGTTAAGGAACAGCAAAGTAAAATCTCAATAGATATAGAGAAAGTATCGAGGTTTAGTGAAAATGACCATGAGCTGTCATCTGGGAGTGATAATAAATATCCGGCTCCTTCAACTCCACAGTTAAAACAGGGGGCAAGATTACTGGATGATGGAGATTGCCATGAACAGACTCATTGCATGACCGAAAAAGAGAGTGGAGAGCTGGATGGGGAAATTATATCTGTCGAAACTACATGTGGGAATTTGAATTCTGAGGGCGCTACACCTCTACCAAGTAAGCCTGAAACGGCCCTAATCAAGAAGGAAGAGTACTTTGCCAATGGTTCCAAGAGTGTGAGTGATGTTTCTACACATATTCATGATGGAAATTTTGTCGGTAGCAATGATGGTAGCACTGCATCTCCCAAAAAAGTAGGTGTTCGCAGTGATGCCAGTGAGATCACACCTAATAAGAAGAAATCAAAGAAGATGAAGGTAGACTGGACACCTGAACTGCACAACAAATTTGTTCAGGCAGTAGAACAACTAGGTATTGATCAAGCCATACCTTCTCGAATACTGGAGCTAATGAAAGTGGAGGGCTTGACAAGGCATAATGTGGCTAGCCATCTTCAGAAATATAGAATGCACAAGAGGCATATCTTGCCCAAGGAAGAAGATCGAAGATGGCCAAATCAAAGAGATATAATGCAAAGGAGCTATTATGTACCAAGACCAACTATGGCCTATCCTCCATATCATTCTAGTCACACCTTATCCCCAGCTCCTATATATCCTATGTGGGGACAACAGGGAAGTCAACCGGCAGGTGTACATATGTGGGGCCCACATAACTATCACTTATGGCAGCCTTTTCCAGGGATGCATGCGGATGCTTGGGGTTGCCCCGTGTTGCCACCTTCTCAAAATCCTTGTTTTTTCTACCCTCAACATTCGCCTGGATTGCATAGTCCTAATAACACTAGTATGCCTCCTAGTTCGTTGGAGCATCACCCGGCAGATGAAGTTGTTGATATGGTAGTAAAGGAGGCAATAAGCAAACCATGGCTGCCCTTACCCTTAGGTCTCAAGCCTCCTTCCACAGATAGTGTATTGGCTGAACTCTCTAGGCAAGGCATATCCACCATCCCTCATGCTTCAAAACCTACTTAG 1731 0.4391 MLILSQIMPSFFFLLLILFCFWAENDAKPAMVCTANDLQSWKDFPKGLRVLLLDGDTNSASDIRVKLEAMDYIVSIFCHENEALSAISSKPDGFHVAIVEVSTSNDQGCFKFLENAKDLPTIMTSNDHCLSTMMKCIALGAVEFLRKPLSEEKLRNIWQHVVHKAFNAGATVLPESLKPVKESVVSMLRLQTDVKEQQSKISIDIEKVSRFSENDHELSSGSDNKYPAPSTPQLKQGARLLDDGDCHEQTHCMTEKESGELDGEIISVETTCGNLNSEGATPLPSKPETALIKKEEYFANGSKSVSDVSTHIHDGNFVGSNDGSTASPKKVGVRSDASEITPNKKKSKKMKVDWTPELHNKFVQAVEQLGIDQAIPSRILELMKVEGLTRHNVASHLQKYRMHKRHILPKEEDRRWPNQRDIMQRSYYVPRPTMAYPPYHSSHTLSPAPIYPMWGQQGSQPAGVHMWGPHNYHLWQPFPGMHADAWGCPVLPPSQNPCFFYPQHSPGLHSPNNTSMPPSSLEHHPADEVVDMVVKEAISKPWLPLPLGLKPPSTDSVLAELSRQGISTIPHASKPT 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g1652 576 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 349 404 IPR006447 GO:0003677
Mibi12g1652 576 PANTHER TRANSCRIPTION ACTIVATOR GLK1 31 572 IPR044825 GO:0003700|GO:0045893
Mibi12g1652 576 SUPERFAMILY CheY-like 46 164 IPR011006 -
Mibi12g1652 576 SUPERFAMILY Homeodomain-like 348 406 IPR009057 -
Mibi12g1652 576 MobiDBLite consensus disorder prediction 316 348 - -
Mibi12g1652 576 MobiDBLite consensus disorder prediction 212 233 - -
Mibi12g1652 576 Gene3D - 345 407 - -
Mibi12g1652 576 Gene3D - 48 169 - -
Mibi12g1652 576 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 346 405 IPR017930 -
Mibi12g1652 576 FunFam Two-component response regulator 345 408 - -
Mibi12g1652 576 Pfam Myb-like DNA-binding domain 352 401 IPR001005 -
Mibi12g1652 576 FunFam Two-component response regulator-like APRR2 47 173 - -
Mibi12g1652 576 ProSiteProfiles Response regulatory domain profile. 49 162 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g1652 Mibi-ChrMibi12 32568702 32574392 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g1652 31 573 Response Regulator Gene Family AT4G18020 48.881 2.40e-140 416
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Mibi12g1652 Myb_DNA-binding 2.4e-08 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi12g1652 12 32568702 32574392 Mibi10g0352 10 5683333 5687551 CCT