Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g1635 ATGACGTGCTTCTTGTTCAAATTCAAAAGTGGGTCGAAATCCTCCTCAGAATCGAAGAAACAAAGACAGGAGAAGAAGAAGAATAGAACGGGTTCAAATCACGCGGTGAATCCAACGAGTTCGGTGCCATCGCCTAGAACCATAACAGAATTGTACAAAGAGAAGGAGCACAATTTGAGGGTTTTCACTTTCCAAGAGCTACGTGAGGCCACAAATGATTTCCATAGGTTGCTGAAGATTGGAGAGGGGGGTTTTGGGAGCGTTTATAAAGGCACTATTAGGCCTCAAGATGGTCGAGGTGATTCTACTGTTGTTGCCATTAAAAGCCTTAACACCCGTGGCTTTCAGGGGCATAAGCAATGGCTGGCAGAGGTCCAATTTCTGGGCATTGTTAATCACCCAAATTTGGTGAAACTATTGGGATACTGCTCTGTAGATGGAGAAAGAGGAATCCAACGACTGTTAGTTTATGAGTTCATGCCAAATAGGAGTCTCGAGGATCATCTTTTCAGACGGTCTTTTCCGACCTTGCCATGGAAAACAAGATTGCAGATCATGCTTGGTGCTGCCCAAGGATTACTTTATCTACACGAGGAGTTAGAGATTCAGGTAATATACCGAGACTTCAAATCTTCCAATGTTCTATTGGACACAAACTTCCATCCAAAGCTTTCAGATTTTGGTCTTGCTAGGGAAGGTCCAATTGGTGATCAGACTCATGTGTCCACTGCGGTGGTCGGGACACATGGATATGCTGCCCCAGAATATATAGAAACAGGGCACCTCAAAGTTCAGAGTGATATATGGAGCTTTGGTGTGGTATTATATGAGATGCTTACAGGGAGGCGATCATTAGATAGAAGACAAGCGAAAGAACAGAAACTTCTAGAATGGGTTAAACAGTATCCTGCTGGTAGTAGGAGGTTCAGTATGATAATGGATTCTCGGCTTAGGAATGAGTATTCACATGGTGCTGCTAGGAAAGTAGCCAAGTTGGCCGACAGATGCTTAAACAAGAAACCTGAAGAAAGACCATCCATGAGGCAGGTAGTGGAAAGCTTGAAGGAAGCATTGCAGTGTTCAGAAACGTCAAATACGGCTTCTGAATCAACTCGATCTAAATTACTACCAACAAGCAAATAG 1143 0.4357 MTCFLFKFKSGSKSSSESKKQRQEKKKNRTGSNHAVNPTSSVPSPRTITELYKEKEHNLRVFTFQELREATNDFHRLLKIGEGGFGSVYKGTIRPQDGRGDSTVVAIKSLNTRGFQGHKQWLAEVQFLGIVNHPNLVKLLGYCSVDGERGIQRLLVYEFMPNRSLEDHLFRRSFPTLPWKTRLQIMLGAAQGLLYLHEELEIQVIYRDFKSSNVLLDTNFHPKLSDFGLAREGPIGDQTHVSTAVVGTHGYAAPEYIETGHLKVQSDIWSFGVVLYEMLTGRRSLDRRQAKEQKLLEWVKQYPAGSRRFSMIMDSRLRNEYSHGAARKVAKLADRCLNKKPEERPSMRQVVESLKEALQCSETSNTASESTRSKLLPTSK 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g1635 380 PANTHER OS01G0588500 PROTEIN-RELATED 21 356 - -
Mibi12g1635 380 CDD STKc_IRAK 80 356 - -
Mibi12g1635 380 Pfam Protein kinase domain 75 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi12g1635 380 MobiDBLite consensus disorder prediction 13 31 - -
Mibi12g1635 380 MobiDBLite consensus disorder prediction 8 45 - -
Mibi12g1635 380 Gene3D Transferase(Phosphotransferase) domain 1 160 377 - -
Mibi12g1635 380 ProSiteProfiles Protein kinase domain profile. 74 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi12g1635 380 SUPERFAMILY Protein kinase-like (PK-like) 39 354 IPR011009 -
Mibi12g1635 380 MobiDBLite consensus disorder prediction 360 380 - -
Mibi12g1635 380 ProSitePatterns Serine/Threonine protein kinases active-site signature. 204 216 IPR008271 GO:0004672|GO:0006468
Mibi12g1635 380 FunFam Lectin-domain containing receptor kinase A4.3 160 372 - -
Mibi12g1635 380 Gene3D Phosphorylase Kinase; domain 1 53 159 - -
Mibi12g1635 380 ProSitePatterns Protein kinases ATP-binding region signature. 80 108 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g1635 Mibi-ChrMibi12 32253410 32255256 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g1635 1 354 Glycoside Hydrolase AT3G07070 41.370 2.85e-88 271
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Mibi12g1635 Pkinase 5.5e-49 CL0016