Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g1625 ATGAGAAGTACGAGTATTACGTTTGTGCGATCTTGGGAGAAAGTTGTGAGGGTGGACATGGAGGAACGGTATGAGCCATTGAAAGAACTTGGTTCTGGGAATTTTGGGGTGGCCAGGTTGGTGAGAGACAAGATCACCAAGGAGCTTGTTGCTGTCAAGTACATAGAAAGAGGGAAAAAGATCGACGAGAAAGTTCAGAGGGAGATCATTAACCATCGATCTTTAAGGCATCCAAATATTATCAAATTTAGAGAGGTCTTGCTGACCCCAACTCACTTAGCTATTGTCATGGAGTATGCTGCAGGTGGCGAACTCTTTGAGAGAATATGCAGTGCTGGCAGATTCAGTGAAGATGAGGCAAGATTTTTCTTCCAACAGCTTATATCTGGTGTTAGCTACTGTCACTCAATGCAAATTTGTCACAGAGATTTGAAATTGGAAAACACTCTCTTGGATGGAAGTCCAACACCTCGACTCAAAATATGTGACTTCGGTTATTCCAAGTCTGCTATACTGCACTCTCAACCGAAATCTACTGTTGGAACACCTGCTTACATTGCTCCTGAGGTTCTGTCACGAAAGGAATACGATGGAAAGATTGCGGATGTTTGGTCATGCGGTGTAACGCTCTATGTCATGTTAGTGGGAGGATACCCATTTGAAGATCCTGAAGATCCTAGGAATTTCCGAAAGACCATTGGAAGAATAATGAGTGTTCAATACTCCATTCCCGACTATGTACGGGTCTCTGCAGATTGCAGACATCTTCTTTCTCACATCTTTGTCGCCAATCCTGCTAAAAGGATAACGATCCCAGAGATAAAACAACACCCTTGGTTTTTGAAGAACTTGCCTAAAGAGATAAATGAGGCTGAGAAAAAAGTCAGTAATGGGGATGATGTAGAGAAAGATCATCGAGGGCAGAGTGTTGAAGAAATAATGCGAATCGTACAAGAGGCAAGGACGCCTGGGAAAAATTCCAAGGGTGGAGGGCAAGCTGGTGGCACAGGAGGATCATTGGACGGTGAGGATGATGATGAAGATGAAGAATCTGAACTTGATGTTAGTGGTGACTATACAACTGCTACAACAACAACAACATAA 1104 0.4321 MRSTSITFVRSWEKVVRVDMEERYEPLKELGSGNFGVARLVRDKITKELVAVKYIERGKKIDEKVQREIINHRSLRHPNIIKFREVLLTPTHLAIVMEYAAGGELFERICSAGRFSEDEARFFFQQLISGVSYCHSMQICHRDLKLENTLLDGSPTPRLKICDFGYSKSAILHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVGGYPFEDPEDPRNFRKTIGRIMSVQYSIPDYVRVSADCRHLLSHIFVANPAKRITIPEIKQHPWFLKNLPKEINEAEKKVSNGDDVEKDHRGQSVEEIMRIVQEARTPGKNSKGGGQAGGTGGSLDGEDDDEDEESELDVSGDYTTATTTTT 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g1625 367 MobiDBLite consensus disorder prediction 317 367 - -
Mibi12g1625 367 Gene3D Phosphorylase Kinase; domain 1 7 99 - -
Mibi12g1625 367 CDD STKc_SnRK2 23 279 - -
Mibi12g1625 367 Gene3D Transferase(Phosphotransferase) domain 1 100 288 - -
Mibi12g1625 367 MobiDBLite consensus disorder prediction 340 355 - -
Mibi12g1625 367 FunFam Serine/threonine-protein kinase SRK2E 19 99 - -
Mibi12g1625 367 Pfam Protein kinase domain 24 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi12g1625 367 SUPERFAMILY Protein kinase-like (PK-like) 12 288 IPR011009 -
Mibi12g1625 367 SMART serkin_6 24 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi12g1625 367 ProSitePatterns Serine/Threonine protein kinases active-site signature. 139 151 IPR008271 GO:0004672|GO:0006468
Mibi12g1625 367 FunFam Serine/threonine-protein kinase SRK2E 100 288 - -
Mibi12g1625 367 ProSiteProfiles Protein kinase domain profile. 24 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi12g1625 367 ProSitePatterns Protein kinases ATP-binding region signature. 30 53 IPR017441 GO:0005524
Mibi12g1625 367 PANTHER SERINE/THREONINE KINASE 22 308 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g1625 Mibi-ChrMibi12 32138927 32142446 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g1625 23 300 CBL-interacting serine-threonine protein kinases AT5G25110 41.581 1.64e-66 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Mibi12g1625 Pkinase 4e-71 CL0016