Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g1623 ATGGGTCGTAAATCTCACGACCCAGAATCCACTGTTCCTAATTGCTTGACCCTCCTTTTGATTTGCTTGGTTTCGGGTGGTTTGGTCTATGCCTTTGTCTCGATGATACTCATAAACACAAGGACGACTTCAGTTTCGGAGTTGGTTGGAGATGATGGATTGGAAATGGAGAATTCTGTGGGAGTTAATAGGGGATGCTGTAGAGGAATTGAAAATTTGGAACTTTGGGGGGCTGCTGTGAAGTGGGGTTCTCAGTTTAAGTTCAATAATTCTGAAGATTGTTGTAACGCTTGTAAATCCATGTGTACTGGGAACGATGGACCATGTCTCTGTAATTCTTGGGTGTTTTGTGGGAATCGTGAGAATTGCGGATCCAAGTTCGGGGAGTGCTGGTTGAAGAAACAAAAGGACAGCTTGGCCCCTGAACGACAAGATGCTGGGGCAAAAGTTAGCTGGACTTCCGGTCTCATCTTTGGAAAAGGAGAAGGCATCATTGAATTGGAAACAGAACACGGAGCTCTTCGCATCAAACTTTTCCCTGATTGTGCTCCACATTCAGTTGCCTACATTCTAGAGCTGCTGGCATTGCGCCATTGTGCAGGTTGCCAATTTTATCGTGCAGAAGGCCGAGGCCAATCATGGGATTCAGAAGGATACCACTTAAAAAATGCTTCTTTTGGCCCCCCTTCTGCATTAATTCAAGGAACCTTAGAAGCTCGGGGAAACCCATTTAATAAAATTCCAGTAGAAGACTGTCCAACAATAAGAAGGGGTTCAGTTGCTTGGGTTAATTCAGGACCAGAATTCTTCATAAGCCTTGCTAACCATGGGGAGTGGAAAAAATCATACACAGTTTTCGGTTCTGTTCTTCCAGAAGACATGGGTACAGCCGAGAAAATTGCTTCACTCCCCACAGCTTCTGATGTTTGGAACAATATTAATGTTTCTGTCTTGGAAAAACCCGTTCCCTTGTTTCTACGAAGAAGCCAGACAAGCCTTGCCGATATCAACATCAATACAAATTCAGATTAG 1032 0.4409 MGRKSHDPESTVPNCLTLLLICLVSGGLVYAFVSMILINTRTTSVSELVGDDGLEMENSVGVNRGCCRGIENLELWGAAVKWGSQFKFNNSEDCCNACKSMCTGNDGPCLCNSWVFCGNRENCGSKFGECWLKKQKDSLAPERQDAGAKVSWTSGLIFGKGEGIIELETEHGALRIKLFPDCAPHSVAYILELLALRHCAGCQFYRAEGRGQSWDSEGYHLKNASFGPPSALIQGTLEARGNPFNKIPVEDCPTIRRGSVAWVNSGPEFFISLANHGEWKKSYTVFGSVLPEDMGTAEKIASLPTASDVWNNINVSVLEKPVPLFLRRSQTSLADININTNSD 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g1623 343 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 165 309 IPR002130 GO:0000413|GO:0003755
Mibi12g1623 343 Gene3D - 159 323 IPR029000 -
Mibi12g1623 343 PANTHER EXPRESSED PROTEIN 1 331 - -
Mibi12g1623 343 SUPERFAMILY Cyclophilin-like 160 315 IPR029000 -
Mibi12g1623 343 FunFam Predicted protein 160 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g1623 Mibi-ChrMibi12 32125791 32128322 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g1623 160 290 U-box Gene Family AT5G67530 26.812 3.71e-06 46.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi12g1623 12 32125791 32128322 Mibi12g1623 12 32125791 32128322 ECH