Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g1614 ATGGCTAATCCATCTTCTTCATCACACTCATCCAATTCCACCCAATTCACCTACTCCGACGGCTCCTACTTCCCCATGCCTTTCCATCTCCAGCAATCTTCTTCATCAACATCATCTCACTATGCTTCGCCTTACGTGGCGGCGTCACCGGCGGTTCCTATTCCTCAACCGCCTTCCGCCGCCGTGCCCGGCGTTTACTCTTATCCACAGTATCAGCAAGCACAACAGTTATTCCAACGTGACGCACAGACTATAACTCCCGAAGCCCTCGAGAATGTGAAAGCAGCCATTGCTAACAGCGAGATTGAGCACAAGGCGGAGACGAAAAAGAAAGCTGTTCCTCGTAAAGCTGCTGGGCAATCATGGGAGGATCCTTCGCTCGCAGAGTGGCCTGAGAATGATCATAGGTTGTTTTGTGGTGATCTTGGTAATGAGGTAAATGATGATGTTCTTTCGAAAGCTTTTTCGAGGTTTCCTTCGTTTAATATGGCTAGAGTTGTGAGGGATAAGCGGAGTGGGAAAACGAAAGGGTATGGATTTGTTAGCTTTGCTGATCCTTCTGACCTTGCTGTTGCTCTTAAAGAGATGAATGGGAAATATGTTGGGAATAGGCCGATTAAATTGTGCAAGAGTAAGTGGAAGGAGAGAACGGATTATGAAGCTTTTGATAAACACAAGAAACAATCTCGGAAGAAACCAAAGCCTTCCAAAGTGGGTGTCTTGCATTACTGA 732 0.4658 MANPSSSSHSSNSTQFTYSDGSYFPMPFHLQQSSSSTSSHYASPYVAASPAVPIPQPPSAAVPGVYSYPQYQQAQQLFQRDAQTITPEALENVKAAIANSEIEHKAETKKKAVPRKAAGQSWEDPSLAEWPENDHRLFCGDLGNEVNDDVLSKAFSRFPSFNMARVVRDKRSGKTKGYGFVSFADPSDLAVALKEMNGKYVGNRPIKLCKSKWKERTDYEAFDKHKKQSRKKPKPSKVGVLHY 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g1614 243 Gene3D - 70 209 IPR012677 -
Mibi12g1614 243 Coils Coil 90 110 - -
Mibi12g1614 243 FunFam RNA-binding protein 42 70 220 - -
Mibi12g1614 243 SUPERFAMILY RNA-binding domain, RBD 118 215 IPR035979 GO:0003676
Mibi12g1614 243 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 137 207 IPR000504 GO:0003723
Mibi12g1614 243 PANTHER TRNA SELENOCYSTEINE 1-ASSOCIATED PROTEIN 1-RELATED-RELATED 63 221 - -
Mibi12g1614 243 MobiDBLite consensus disorder prediction 222 243 - -
Mibi12g1614 243 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 135 213 IPR000504 GO:0003723
Mibi12g1614 243 MobiDBLite consensus disorder prediction 106 126 - -
Mibi12g1614 243 CDD RRM_RBM42 129 211 IPR034215 -
Mibi12g1614 243 SMART rrm1_1 136 209 IPR000504 GO:0003723
Mibi12g1614 243 MobiDBLite consensus disorder prediction 227 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g1614 Mibi-ChrMibi12 32022992 32023723 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g1614 85 243 Eukaryotic Initiation Factors Gene Family AT1G71770 22.754 6.20e-12 63.2