Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g1611 ATGGAGCTTTATTCAAAATACCAAGTGGTCCTTGTTTGTGTGCTGCTCTTGCCTGCACTATGCCTCTCCCAATTCACTGATTCTAGAGCCACATTTACTGTTACCCCCGATGGCAACGGAAGCCCAACCGGAGCTTGTGGATTTGGAAAATACGGCAGCACTGAAAACTCTGGGAGGGTGGCCGCGGTGTCTGGGCTATGGAGAGACGGCGCTGGATGTGGCGCTTGCTACCAGGTAAAGTGCAAGGATCCAAAACTATGCAGCACGGACGGTGTAATAATAGTTGCAACAAACCAAGGTTCAGGAGACAGGACAGACTTTGTGATGAGTCTTAATGGTTTCGTGAAGCTGGGATTGAATTCAAGTGCTGCAGAAGAGCTCAAGAAACTGGGAACCGTTGATATCCAATATAAGAGGGTCCCATGTACTTTCGACGGCTCCAACGTCAAGATCCAGATCAACGAGCAGAGCAGATTCCCTTCTTACCTCGCTATTGCCGTTATCTACATCCCAGGATCAAACGACGTCGTTGCCGTTGAGATATCCACTGATGGTCAAAATTGGATTGGTTTGAGAAGAGTGTTTGGAGGAGTGTTTGATATATCAAATCCACCACGTGGACCATTTAAGGTGAGGGTGAAATTCAGTGGGAGCCAAACTTGGGTGGTGTCTCCCAACAACGTTATTCCTGCTAACTGGAATGTTGGAGCTATTTATGACACTGGAATTCATGTCTAG 738 0.4743 MELYSKYQVVLVCVLLLPALCLSQFTDSRATFTVTPDGNGSPTGACGFGKYGSTENSGRVAAVSGLWRDGAGCGACYQVKCKDPKLCSTDGVIIVATNQGSGDRTDFVMSLNGFVKLGLNSSAAEELKKLGTVDIQYKRVPCTFDGSNVKIQINEQSRFPSYLAIAVIYIPGSNDVVAVEISTDGQNWIGLRRVFGGVFDISNPPRGPFKVRVKFSGSQTWVVSPNNVIPANWNVGAIYDTGIHV 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g1611 245 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 161 241 IPR007117 -
Mibi12g1611 245 Gene3D - 144 245 IPR036749 -
Mibi12g1611 245 PANTHER EXPANSIN-B3 14 243 - -
Mibi12g1611 245 SUPERFAMILY Barwin-like endoglucanases 11 146 IPR036908 -
Mibi12g1611 245 SMART dpbb_1 60 137 IPR007112 -
Mibi12g1611 245 Pfam Lytic transglycolase 64 137 IPR009009 -
Mibi12g1611 245 SUPERFAMILY PHL pollen allergen 148 240 IPR036749 -
Mibi12g1611 245 Gene3D - 19 143 IPR036908 -
Mibi12g1611 245 PRINTS Expansin/Lol pI family signature 227 241 IPR007118 GO:0005576
Mibi12g1611 245 PRINTS Expansin/Lol pI family signature 42 60 IPR007118 GO:0005576
Mibi12g1611 245 PRINTS Expansin/Lol pI family signature 130 146 IPR007118 GO:0005576
Mibi12g1611 245 Pfam Expansin C-terminal domain 149 230 IPR007117 -
Mibi12g1611 245 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 43 147 IPR007112 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g1611 Mibi-ChrMibi12 31989405 31991104 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g1611 14 243 Expansin Gene Family AT4G17030 45.957 2.19e-71 217