Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g1607 ATGGAACTTCATCCTAAATACCAAGTTGGCCTTGCTTGCATGCTCCTGCTCTTACCTGCACTATGTTTATCCCAAGGCTTCACAGACTCCAGAGCAACCTTTTATGGTACCGCCGATGGCTATGGAACTCCAACTGGAGCTTGTGGGTATGGAGATTACGGCAGAACTGTGAACTATGGGAAAGTTGCAGGCGTGGCTGGGTTATGGAGAGGTGGCGCTGGATGTGGTGCTTGTTACCAATTGAAGAAAAACGGCGTCGTAGACATCGAATACAAGAGAGTACCATGCACATACAATGGTTACAACGTGCGTATCAAGATCCATGAGTCTAGCAGATACCCAGATTACCTTGCTCTTGTCATCCAATACGTTCCTGGAGTGAAGGACGTCACTGCCGTTGAGATTTATGACAATGACCAACATGTATGGAAGCCAATGAGGAGGGTGTATGGGGCAGTGTTTGATATAGTTGGAGCTCCGAGTGGACCATTGAAGCTGAGGCTGCAATTCAGTGGCAGAAAAGGTTGGGTGCAGGCGACCAAGAGTGCAATTCCTGGGGATTGGAAGATTGGTGCTTCTTATGACTCTCAAGTTCATGCCTAA 603 0.4793 MELHPKYQVGLACMLLLLPALCLSQGFTDSRATFYGTADGYGTPTGACGYGDYGRTVNYGKVAGVAGLWRGGAGCGACYQLKKNGVVDIEYKRVPCTYNGYNVRIKIHESSRYPDYLALVIQYVPGVKDVTAVEIYDNDQHVWKPMRRVYGAVFDIVGAPSGPLKLRLQFSGRKGWVQATKSAIPGDWKIGASYDSQVHA 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g1607 200 Pfam Expansin C-terminal domain 103 185 IPR007117 -
Mibi12g1607 200 SUPERFAMILY Barwin-like endoglucanases 14 100 IPR036908 -
Mibi12g1607 200 PANTHER EXPANSIN-B3 18 82 - -
Mibi12g1607 200 Gene3D - 95 197 IPR036749 -
Mibi12g1607 200 SUPERFAMILY PHL pollen allergen 102 196 IPR036749 -
Mibi12g1607 200 Gene3D - 20 84 IPR036908 -
Mibi12g1607 200 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 115 196 IPR007117 -
Mibi12g1607 200 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 45 108 IPR007112 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g1607 Mibi-ChrMibi12 31947369 31949122 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g1607 14 198 Expansin Gene Family AT4G17030 40.851 1.68e-56 177