Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g1604 ATGGGGGTTATGGAGAATATGCTACATTCAAAGTCATTAACCAGGGTTACATCAATCAATAATGGTAATAATGATGAAAGATCTGGGAAACCATGGAAGGAAAATGGTCATCGCACTGTTCATTCCCAGCTCAATTTTAAGCGAAGAAAAGTGTCCGCCGTTCGAGATTTTCCTGAAGGTTGCGGGCGGTCTGTGCCCAGAATTGTTTCAACACCAAATGTAAATAATGCTAACTCTGGTGTTGACGATGGTACATTAGTCGAGGATAAGAGTGGTGAAGATTTAAAGGATAAATTTGTTAGAACTGTGCAGGAGCCTCCTTTGACAAACGATGGAACTTTAAAAATGGGGTTGGTGGGCCTTGAAGATTTGGAATCCAGTAGAACAGCAGAAACAATAAAATGTGATCCTTCTAAGATGTCAAAAGGCTTGCATAAAAATGCCACTTCTTCTCCAGTAGGTGAGGTGGTTTTGTCAGGTAGTAAATTATTGTCACAAATTGTAAGTAATGCTGATGATAAGACTGTAAAGAGAAGGGTTTTCCCCCAAAGACGAGTTTCAGCCACTAGAGACTTTCCTCCTTTTTGTGGACGAAATGCTCTGCGCCTTAGTAAGGATGAGTGTTTAGAGGAGATCTCTTTGAAGGATAACAAAGTCATGGGTCAAAAGGACCTGGCTGTGGATGGCAAGGAATTGAAAAAGGTCACGGCCTCTGATGTGAAAGAAGTGGAAAAGATTGTTGAATGTGGAGGTGCCTGCAATCCAGTGAATATGGTTCAAGGTGATTTTGAAGGGAATGTTATGCAGGCAGTGAATAAGTTGGATGGATTTGGAGCATCTTCTGAGATGAAATTGTTACCAAAAAATCCAGGAGATAAGGACATTGCAATTCTTGATGGAAGCAATCACAATCAGGTATTAACTAATTCCCCACCCAAAGTTGAAGAAGAAAGCAGATATGCTACACAGGTTGAGGGAACACTAGGAAAGGAGATGGTAGTTAAAGAAAGCAGAGATGCTAGACAGGTTGAGGAAATGCTAGGAAAAGAGATGGTAGTTTATTCAGGAGCTCAAAGCCCAGTGGCAGTGCCTCTGGGTACGTCTGAGTCACCAGGAGATTTCAATGAATTGCAGGCTCCATCTAGCAGGGTTGTTGTGCTTGGCGTGATGTCTGCATCGACATGTCCTTGGAGGAAAAGTATAGGTACTCCCAAATCTAGTACTGTTGGTGGTGAAAATGATAGAAAGGTAAAGAAGAATGACTTTTTTGCACGGTTTGACAGGTCTAAAGTTGCTACTAAGTCTAAAGACTCACCAAATTGTTCTGGGAAGAAGCTTGTAGTAAAGAAAAAAGGAAGCGATGCTGAAGGTATGGGTCAACTAGTAGTTTGGGAGAATAAAGATTCACTTGACTCTGATAAGAACATGGAAGAAACAACTGTTGTCCCAAAATCCCAAGGTTTTGATGTGCATGTTCCTCCTCTTGGTCACGGGAATCGAACTGGTAATGACATGGACTCAAATGTAACTCGAAATAAAGTGAGGGAGACATTGCGCCTTTTCCAAGCTGTTACTAGAAAGCTATTGCAGGAGGAAGAATCAAAGCCAAGAGACAAAGGAAACACTAATAGAAAGATGAGGATTGATACAATAGCAGCTAAGATCCTTAAGGATAAAGGCAAATATGTTAACACAGGGAAGGCAATCTTGGGACTCGTCCCTGGGGTTGAAGTTGGTGATGAATTTCAGTACTGGGTGGAACTTAATATGATTGGTCTTCATCGTCCGTCTCAGTCAGGCATAGATTATGTAAAGCATGATGATAGGATCCTTGCAACTAGTGTGGTTTCATCAAAGGGCTATGCTGATGAGTCGGGCAGTTCAGATGTCTTGACTTATACAGGGCAGGGAGGGGGTATGTTAAAGAATGGTAAAGAACCTGAAGATCAGAAGCTTGAGAGGGGCAATCTTGCTTTGAAGAATAGTGTTGCAGAAAAGAATCCTGTCAGGGTAATACGTGGCTGTGAATCAGCTGATGGAAAAAGTAGGAGATATGTTTATGACGGGCTTTATGAAGTTGAGGCGTATTGGCAGGAAACGGGGCCACATGGTAGGTTGGTTTATAGGTTTCGGATGCGAAGAATCCCAGGTCAACCAGAACTTGCTTGGAAAGAAGTGAAGGAATGCAAAAAATTCAAAAAGAGAGAGGGTGTATGTGTTGACGACATTTCTAATGGGAAAGAGCCAATTCCAATATGTGCTGTGAACACCATAGATGATGAAAAACCCCCATCATTTGAATACATAACCAGAACGATATATCCTAATTGGTGCAATCCCATTCCTCTAGAGGGATGTAGTTGTACAAATGGATGCTCCGACTCTGATAAATGTGCTTGTGCGGTCAAAAATGGGGGAGAGATCCCATACAACCATAATGGGGCCATTGTAGAAGCCAAGCCTCTTGTGTTTGAGTGTGGTATTTCTTGCAGTTGTCCTCCCTCATGTCATAACAGAGCCAGCCAACATGGCATAAAATTTCAACTTGAAGTTTTTAAAACCAAGACAAGAGGATGGGGTGTGAGATCCCTAAATTCTATCCCTTCAGGAAGTTTTATATGTGAATATATAGGAGAGCTTCTTGAAGAGAAGGAAGCAGAACAAAGAACTGGTAATGATGAATATCTGTTTGATATCGGGAATAGCACCAACAGTACTCTTTGGGATGAACTTTCAAGCCTAATGCCTGAGGCACAGTCAAGCTCTTGTGAAATTGTGGAAAATAGTGGCTTCACTATTGATGCTGCCCGGTATGGCAATGTTGGGAGATTTTTCAATCATAGTTGCTCCCCTAATCTTTATGCTCAAAATGTTCTTTACGATCATGATGACAAGAGAATACCTCACATAATGTTTTTTGCTGCTGAAAATATTCCTCCTCTGCAAGAGCTGTGTTATGATTACAATTATACGATAGATCAAGTTCGTGATTCTGATGGCAATATAAAGAGAAAGGACTGTTTTTGTGGTTCTGCTGAGTGTACTGGCAGGATGTATTGA 3060 0.4144 MGVMENMLHSKSLTRVTSINNGNNDERSGKPWKENGHRTVHSQLNFKRRKVSAVRDFPEGCGRSVPRIVSTPNVNNANSGVDDGTLVEDKSGEDLKDKFVRTVQEPPLTNDGTLKMGLVGLEDLESSRTAETIKCDPSKMSKGLHKNATSSPVGEVVLSGSKLLSQIVSNADDKTVKRRVFPQRRVSATRDFPPFCGRNALRLSKDECLEEISLKDNKVMGQKDLAVDGKELKKVTASDVKEVEKIVECGGACNPVNMVQGDFEGNVMQAVNKLDGFGASSEMKLLPKNPGDKDIAILDGSNHNQVLTNSPPKVEEESRYATQVEGTLGKEMVVKESRDARQVEEMLGKEMVVYSGAQSPVAVPLGTSESPGDFNELQAPSSRVVVLGVMSASTCPWRKSIGTPKSSTVGGENDRKVKKNDFFARFDRSKVATKSKDSPNCSGKKLVVKKKGSDAEGMGQLVVWENKDSLDSDKNMEETTVVPKSQGFDVHVPPLGHGNRTGNDMDSNVTRNKVRETLRLFQAVTRKLLQEEESKPRDKGNTNRKMRIDTIAAKILKDKGKYVNTGKAILGLVPGVEVGDEFQYWVELNMIGLHRPSQSGIDYVKHDDRILATSVVSSKGYADESGSSDVLTYTGQGGGMLKNGKEPEDQKLERGNLALKNSVAEKNPVRVIRGCESADGKSRRYVYDGLYEVEAYWQETGPHGRLVYRFRMRRIPGQPELAWKEVKECKKFKKREGVCVDDISNGKEPIPICAVNTIDDEKPPSFEYITRTIYPNWCNPIPLEGCSCTNGCSDSDKCACAVKNGGEIPYNHNGAIVEAKPLVFECGISCSCPPSCHNRASQHGIKFQLEVFKTKTRGWGVRSLNSIPSGSFICEYIGELLEEKEAEQRTGNDEYLFDIGNSTNSTLWDELSSLMPEAQSSSCEIVENSGFTIDAARYGNVGRFFNHSCSPNLYAQNVLYDHDDKRIPHIMFFAAENIPPLQELCYDYNYTIDQVRDSDGNIKRKDCFCGSAECTGRMY 1019
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g1604 1019 MobiDBLite consensus disorder prediction 68 89 - -
Mibi12g1604 1019 Pfam SET domain 858 989 IPR001214 GO:0005515
Mibi12g1604 1019 ProSiteProfiles Post-SET domain profile. 1003 1019 IPR003616 -
Mibi12g1604 1019 SUPERFAMILY PUA domain-like 553 727 IPR015947 -
Mibi12g1604 1019 CDD SET_AtSUVH-like 764 990 - -
Mibi12g1604 1019 ProSiteProfiles SET domain profile. 847 989 IPR001214 GO:0005515
Mibi12g1604 1019 SMART set_7 847 995 IPR001214 GO:0005515
Mibi12g1604 1019 MobiDBLite consensus disorder prediction 68 82 - -
Mibi12g1604 1019 ProSiteProfiles YDG domain profile. 571 714 IPR003105 -
Mibi12g1604 1019 SMART PostSET_3 1003 1019 IPR003616 -
Mibi12g1604 1019 SMART G9a_1 566 718 IPR003105 -
Mibi12g1604 1019 ProSiteProfiles Pre-SET domain profile. 784 844 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Mibi12g1604 1019 Gene3D - 552 734 IPR036987 -
Mibi12g1604 1019 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 431 1013 - -
Mibi12g1604 1019 MobiDBLite consensus disorder prediction 486 508 - -
Mibi12g1604 1019 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 330 1019 IPR025794 GO:0016571
Mibi12g1604 1019 Pfam Pre-SET motif 743 839 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Mibi12g1604 1019 Gene3D SET domain 735 1019 IPR046341 -
Mibi12g1604 1019 Pfam SAD/SRA domain 570 718 IPR003105 -
Mibi12g1604 1019 SMART preset_2 740 831 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Mibi12g1604 1019 SUPERFAMILY SET domain 730 995 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g1604 Mibi-ChrMibi12 31937156 31940215 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g1604 508 1016 Su(var)3-9 homologs AT5G04940 39.619 5.03e-116 370
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Mibi12g1604 SAD_SRA 7.8e-47 CL0178