Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g1603 ATGGGAAAGCAAGGTCCTTGCTATCACTGTGGAGTTACAAGCACACCACTTTGGCGCAATGGCCCGCCAGAGAAACCAGTATTATGCAATGCATGTGGTTCTCGGTGGAGGACAAAGGGAACACTTGCAAATTATACTCCATTACATGCTCGGACAGAAACTGATGATATTGAGGACAAAAGGTTTTCAAGGGTAAAGAGCATATCACTACATAAGAACAAAGAGGTGAAATTGTCTAAAAGAAAGCTGAACGAAGATAATTTATTTACTGGGGTGGCTAGCCTCGATTACAACCAAGGGTTCCGAAAGGTTACTGATGATGATACAAGCAATAGATCAAGTTCTGGATCAGCTATCTCTAACTCAGAGAGTTGTGCTCAATTTGGTGGCACCGATGCTAGTGATTTGACAGGTCCTGCTCAGTCAGTTGTCTGGGATGCCATGGTGCCTTCAAAGAAGAGAACATGTGTGGGTCGCCCAAAGCAATCTTCTGTCGAGAAACTTACAAAAGATTTGTACTCTATTCTTCAAGAACAACAGTCTTATTTTTCAGCATCCTCTGAAGAGGATCTTCTTTTTGAAAGTGAAACGCCAATGGTCTCTGTGGAGATAGGACATGGAAGTGTTCTTATGAGGCACCCGAGCTGTATAGCTCGTGAAGAAGAGTCTGAGGCCAGCTCTCTTTCAGTTGATAACAAACAGTGCCCGACCAGTGAGGCATATTCATGTTCTGGCTCCGCTCATGTGCATAATGGTTACGGCGGTGTGAATTTTCCATCTCAGGGGGTTCAAAAGATCAGGAGCTCTGCTGGCCAAGGAATGCTGCAAGAGCAACTTAAGAGGGATAAGACTCAACATGATAAGGTTCAAATCCTTGGAAATAAGTCACCACTGTGCTCGGTGGATTTAAATGATGTCATTAACTATGATGAATTTATGAGGACCTTGACAAATGAAGAGCAGCAACAATTACTCCAGTGTCTCACTGCGGTTGATACTACTAAACTTCCTGATAGCCTGAAAAGCATGTTTAGCAGCTCTCAATTCAGGGAGAACATGAATTATTTTCAGCAGCTTCTTGCAGAAGGTGTCTTTGATATCTCCTTATCAGGGACAAAACCTGAAGACTGCAAGACTTTGAAAAGGCTTGCGTTATCCAATCTGTCGAAATCAAAATGGGTGGAACATTATAACTCACTTAAGAAACATAAGAACAAGGCTGGAAAATCTGATGCTTCGGGTTCTTCTGGCACTGCATCTAGTAATGCTACAAATGCCAAGAGATATCACGACAGCCAAAGTAAAAATATGTCAGAATTGAAGACAACAATGAGGAGTCCTAAGAGGGTGATGATGAAGGTTGGCTGTGAGGTTAAGGAAGCTGAAGAATATGGTTCTTATTTTAGTCCAAAAAGCCTATTTGCTTTGCCTTCTGATGGTGAGCCCGTCATGCTGGACTCTTTCAATTTTGTTGAGGAGAGTGGTGATCAGGACCTGCTGCTAGAGGTGCCATCCAACGGTTCTTTGCCCGAGGCAGAGCTTCTGCACCCAAATATAAGCTTTGGTACTCAAGCCAGCACCAGTAGTAGCTCAATATACCATCGTATTGGCCATCCCTGA 1620 0.4333 MGKQGPCYHCGVTSTPLWRNGPPEKPVLCNACGSRWRTKGTLANYTPLHARTETDDIEDKRFSRVKSISLHKNKEVKLSKRKLNEDNLFTGVASLDYNQGFRKVTDDDTSNRSSSGSAISNSESCAQFGGTDASDLTGPAQSVVWDAMVPSKKRTCVGRPKQSSVEKLTKDLYSILQEQQSYFSASSEEDLLFESETPMVSVEIGHGSVLMRHPSCIAREEESEASSLSVDNKQCPTSEAYSCSGSAHVHNGYGGVNFPSQGVQKIRSSAGQGMLQEQLKRDKTQHDKVQILGNKSPLCSVDLNDVINYDEFMRTLTNEEQQQLLQCLTAVDTTKLPDSLKSMFSSSQFRENMNYFQQLLAEGVFDISLSGTKPEDCKTLKRLALSNLSKSKWVEHYNSLKKHKNKAGKSDASGSSGTASSNATNAKRYHDSQSKNMSELKTTMRSPKRVMMKVGCEVKEAEEYGSYFSPKSLFALPSDGEPVMLDSFNFVEESGDQDLLLEVPSNGSLPEAELLHPNISFGTQASTSSSSIYHRIGHP 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g1603 539 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 5 45 - -
Mibi12g1603 539 Pfam Asx homology domain 281 404 IPR028020 -
Mibi12g1603 539 FunFam GATA transcription factor 27 3 85 - -
Mibi12g1603 539 Pfam GATA zinc finger 7 41 IPR000679 GO:0006355|GO:0043565
Mibi12g1603 539 PANTHER OSJNBB0038F03.10 PROTEIN 1 533 IPR044589 -
Mibi12g1603 539 ProSitePatterns GATA-type zinc finger domain. 7 32 IPR000679 GO:0006355|GO:0043565
Mibi12g1603 539 MobiDBLite consensus disorder prediction 410 443 - -
Mibi12g1603 539 SMART GATA_3 1 53 IPR000679 GO:0006355|GO:0043565
Mibi12g1603 539 Gene3D - 288 387 IPR038108 -
Mibi12g1603 539 ProSiteProfiles GATA-type zinc finger domain profile. 7 40 IPR000679 GO:0006355|GO:0043565
Mibi12g1603 539 CDD ZnF_GATA 6 53 IPR000679 GO:0006355|GO:0043565
Mibi12g1603 539 Gene3D - 3 85 IPR013088 GO:0006355|GO:0008270
Mibi12g1603 539 MobiDBLite consensus disorder prediction 404 445 - -
Mibi12g1603 539 ProSiteProfiles DEUBAD (DEUBiquitinase ADaptor) domain profile. 294 406 IPR044867 -
Mibi12g1603 539 MobiDBLite consensus disorder prediction 102 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g1603 Mibi-ChrMibi12 31927032 31932425 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g1603 1 516 C2C2-Gata Transcription Factor Family AT4G17570 53.802 4.16e-163 472
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Mibi12g1603 ASXH 6.1e-10 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi12g1603 12 31927032 31932425 Mibi10g0382 10 6142732 6147628 CCT