Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g1585 ATGGCCATTCCCAATATCTTCTTCTTCTTCTTCTTCGCCCTTTTCTTGCTTCAACCACTTCACTTGGCTTTTGGAATCGTTTCTTTGAACCAAACACTCTCCACCAATGATAAAAATGCTTCATGGCTCTCTGCTTCTGAAGATTTTGCTTTCGGATTCCGCCAAATAGAAAACACAAGTATCTTTATGCTTGCCATCTGGTTTGCCAAAATACCAGAACAAACCATTGTCTGGAATGCAGACATCCAACCTCCAATACCACAAGGATCCACGGTTCAGCTCACATCTAAGGGTCTCTCACTCACAACTTACCCCCAAGGCCAACCTATGTTGCTAAATGGTGAACTACAAGGAGTTGTGTCCCATGCAGAAATGCGTGATCATGGAAATTTTGTTATGGTATCCTCAAATTCTTCCTATTTGTGGCAAAGTTTTGACAATCCCACTGATACACTGTTGCCAAACCAGACTCTGCCTCTCAAAGGCAAGTTGTCGTCTCACTTGACACAAACCAATTACACAAAGGGAAGGTTTGAGCTTTATTTTGATGATAGCACCAATCTCTTGTTAAGTCAGATAGGATGGCCGACTCAATCTCGTTACACTAATTACTTTAATGTCAACACGAGTTCACCAACCAATGCTAATGACTCTGCTTTACAGCTAGTCTTTAATACATCAGATATTTATGTAGAGACAAGGGGTGGAGATCATAAACCCCTCGAGTCTGGATGGTCCGCCCCAAATATTGATGTTAACAAATTTTACTACAGGGCTACACTTGATTACTACGGGGTTTTTAAGTTATACTACCATCCAAGAGAATCCTATTATTCCAACCAAAATTGGTCAGTCATGACCAATGTCCCTCAAGACGTTTGCCAAGCAACACCTAGCAGTTTGGGTAGTGGTGCTTGTGGCTACAATAGCTACTGCACCTGGGATGACTACAACAAGAGTCCATCATGTAAGTGTCCAGAAGAGTATTCTTTGGTGGATCCAAACAATGAATTTGGAGGATGCAAACCTAATTTACCCGTTGGTTGTGAAGTTGATGATCCAGAAGGGGTATATGATGCGGTGTCTTTGCCAAATGTGAATTGGCCTTCTGGAGATTATGAAAAGTTGATCGGTTATACAGAGGAAGAATGTAAACGTTCTTGCTTGCATGATTGTAATTGTGCAGCATTTGTCTCTAACTCACTAGGGCAATGTTGGAAGAAAAGATTTCCCCTCTCTAACGGAAGATTGGGTGATGATATGCAGGGTTTTACAACAGCAATCTTCAAAATAAGAAGAATAAAACCAGAGGGTAATCTTAATCCTGTTCTGGAAAGTAAGGGAGACCAGATCAAACTTGCCCTATTAGGGTCTCTAATCAGCTCCCTTGTTATTATTGCTCTACTGGTAGTCACAGTTATATCAATTATTATGTTGAAGTCCAAAAAGGTTGTTCAAGTTTCAAGTTTCGTTGAAACAAATGTGCACTCTTTCACATATGCAGCACTGAAGGAGGCAACACATGGGTTCAGTGAGGAAGTAGGAAGAGGTTCTTTTGGAATTGTGTACAAAGGCACCCTCAGATCAGCAACCAATAATACTGATATTGCGGTGAAGAGATTGGATAGAATAGCTCGAGAACGTGAGACGGAATTTAGGAATGAGTTGAGTGCTATTGGAAGAACATGCCACAGAAATTTGGTTAGGTTGATTGGGTTCTGTGATGAGGAAATTCATAGACTTTTGATAATTTGCTGCAGAAGAAGCGTGGAGAAGGATCTGGATGAGGAGGAGGAAGGCAAGGCAATACTAATAGATTGGGCTTATGATTGCTATATGCAGGGAAGAATAGATATTCTGGTAGAGAATGATACGGAGGCCATTGCTGACATAAAGAGATTGAAGAAGTGGGTGATGATAGCAATATGGTGCATTCAAGAGAATCCAGAAAAAAGGCCAAACATGAAGACTGTGATGCAAATGTTGGAAGGCGTCGTTGAAGTTCCAATTCCTCCAACACCTTCGTCCTTCATCTAA 2037 0.4114 MAIPNIFFFFFFALFLLQPLHLAFGIVSLNQTLSTNDKNASWLSASEDFAFGFRQIENTSIFMLAIWFAKIPEQTIVWNADIQPPIPQGSTVQLTSKGLSLTTYPQGQPMLLNGELQGVVSHAEMRDHGNFVMVSSNSSYLWQSFDNPTDTLLPNQTLPLKGKLSSHLTQTNYTKGRFELYFDDSTNLLLSQIGWPTQSRYTNYFNVNTSSPTNANDSALQLVFNTSDIYVETRGGDHKPLESGWSAPNIDVNKFYYRATLDYYGVFKLYYHPRESYYSNQNWSVMTNVPQDVCQATPSSLGSGACGYNSYCTWDDYNKSPSCKCPEEYSLVDPNNEFGGCKPNLPVGCEVDDPEGVYDAVSLPNVNWPSGDYEKLIGYTEEECKRSCLHDCNCAAFVSNSLGQCWKKRFPLSNGRLGDDMQGFTTAIFKIRRIKPEGNLNPVLESKGDQIKLALLGSLISSLVIIALLVVTVISIIMLKSKKVVQVSSFVETNVHSFTYAALKEATHGFSEEVGRGSFGIVYKGTLRSATNNTDIAVKRLDRIARERETEFRNELSAIGRTCHRNLVRLIGFCDEEIHRLLIICCRRSVEKDLDEEEEGKAILIDWAYDCYMQGRIDILVENDTEAIADIKRLKKWVMIAIWCIQENPEKRPNMKTVMQMLEGVVEVPIPPTPSSFI 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g1585 678 CDD PAN_AP_plant 346 420 - -
Mibi12g1585 678 Pfam Protein tyrosine and serine/threonine kinase 510 584 IPR001245 GO:0004672|GO:0006468
Mibi12g1585 678 Gene3D - 26 147 IPR036426 -
Mibi12g1585 678 Pfam D-mannose binding lectin 75 161 IPR001480 -
Mibi12g1585 678 SMART tyrkin_6 510 662 IPR020635 GO:0004713|GO:0006468
Mibi12g1585 678 SMART blect_4 30 148 IPR001480 -
Mibi12g1585 678 SUPERFAMILY alpha-D-mannose-specific plant lectins 62 191 IPR036426 -
Mibi12g1585 678 FunFam S-receptor-like serine/threonine-protein kinase 478 585 - -
Mibi12g1585 678 Gene3D Transferase(Phosphotransferase) domain 1 583 671 - -
Mibi12g1585 678 Pfam PAN-like domain 362 406 IPR003609 -
Mibi12g1585 678 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase LECRK1 23 146 - -
Mibi12g1585 678 ProSitePatterns Protein kinases ATP-binding region signature. 514 539 IPR017441 GO:0005524
Mibi12g1585 678 ProSiteProfiles Bulb-type lectin domain profile. 24 146 IPR001480 -
Mibi12g1585 678 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 582 674 - -
Mibi12g1585 678 ProSiteProfiles Protein kinase domain profile. 508 678 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi12g1585 678 SUPERFAMILY Protein kinase-like (PK-like) 489 582 IPR011009 -
Mibi12g1585 678 Gene3D Phosphorylase Kinase; domain 1 471 582 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g1585 Mibi-ChrMibi12 31758497 31760890 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g1585 445 608 Receptor kinase-like Gene Family AT4G29050 39.766 1.85e-20 94.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Mibi12g1585 PK_Tyr_Ser-Thr 6.7e-11 CL0016