Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g1579 ATGCAAGACAACAACGCCATGTCGGGGCCCACCAGCAGCAGCAATTCATACGACTCCGATTTAGTGTTCTTGGATTCCATTCGAAGCCACTTGCTGGGTGACTCCGACGAATTATTGCCTCTCTCACAGGACCAGAACGACCCCCAAGACATGCTCCTGTACGGTGTACTACGGGAATCACTCCACGTCGGATGGGCCCCACCGGACATTGCGGTGAAACCGGAGGCACCGAAGATGGCGGCGCCGCAAGAGAAGGGAAGGAGTAGGCATTACAGAGGGGTGCGTCAGAGGCCATGGGGGAAGTATGCGGCGGAGATAAGAGACCCCTCTAAGAATGGTGCTCGTGTGTGGTTGGGTACGTTTGAGACGGCTGAGGATGCGGCTCTTGCTTACGACCGAGCCGCTTTTAGGATGCGTGGCTCCAGGGCTCTTCTTAATTTCCCCCTCAGGGTTAACTCTGGTGAGCCTGACCCTGTCAGGGTGAGGGCAAAACGGTCTTCTCCTTCTCAGCCATTGCAGAGTGGGAGGCCACAGAAGAAGGTGGCCACAAGGGACGTGGCTTCTTCTTCTTCTACAGATGCTCACCACCTATGGTTCACCTAA 603 0.5589 MQDNNAMSGPTSSSNSYDSDLVFLDSIRSHLLGDSDELLPLSQDQNDPQDMLLYGVLRESLHVGWAPPDIAVKPEAPKMAAPQEKGRSRHYRGVRQRPWGKYAAEIRDPSKNGARVWLGTFETAEDAALAYDRAAFRMRGSRALLNFPLRVNSGEPDPVRVRAKRSSPSQPLQSGRPQKKVATRDVASSSSTDAHHLWFT 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g1579 200 FunFam Ethylene-responsive transcription factor 2 89 149 - -
Mibi12g1579 200 ProSiteProfiles AP2/ERF domain profile. 90 148 IPR001471 GO:0003700|GO:0006355
Mibi12g1579 200 CDD AP2 90 148 IPR001471 GO:0003700|GO:0006355
Mibi12g1579 200 MobiDBLite consensus disorder prediction 166 200 - -
Mibi12g1579 200 Pfam AP2 domain 90 140 IPR001471 GO:0003700|GO:0006355
Mibi12g1579 200 SMART rav1_2 90 154 IPR001471 GO:0003700|GO:0006355
Mibi12g1579 200 MobiDBLite consensus disorder prediction 154 200 - -
Mibi12g1579 200 PRINTS Ethylene responsive element binding protein signature 91 102 IPR001471 GO:0003700|GO:0006355
Mibi12g1579 200 PRINTS Ethylene responsive element binding protein signature 114 130 IPR001471 GO:0003700|GO:0006355
Mibi12g1579 200 PANTHER DNA-BINDING DOMAIN 66 179 IPR044808 GO:0003700|GO:0009873
Mibi12g1579 200 SUPERFAMILY DNA-binding domain 90 150 IPR016177 GO:0003677
Mibi12g1579 200 Gene3D AP2/ERF domain 89 151 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g1579 Mibi-ChrMibi12 31684923 31685525 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g1579 19 193 AP2-EREBP Transcription Factor Family AT4G17500 46.281 9.42e-60 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mibi12g1579 AP2 1.4e-15 CL0081