Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g1574 ATGCATCTTGAGGAATTGAAGGGAGAAGAGGTGGGCGGTGGAGAGGAAGGAAAGTTATATCTTGGATCAAGTTTTGTGGGATCAGATGCGAAAAGGGCTCTGGTTGGAGCGGGGGCTCGTGCTCTCTTCTATCCCACTCTGTTTTATAATGTTGTTAGGAATAAGATACAGTCCGAGTTTCGGTGGTGGGATAAGGTTGATGAGTTCATATTATTAGGTGCTGTTCCCTTCCCTATTGATGTTCCCCGTTTAAAGGAGCTGGGTGTTCGTGGAGTCATCACATTGAATGAGTCATATGAGACTTTGGTGCCATCATCACTCTATCATGATCATGGAATTGATCATCTTGTGATTCCCACCAGAGATTACTGTTTTGCACCTTCATTGCACGATATATGCTCTGCTGTAGATTTCATTCATGAAAATGCATTGGCGGGACGGGTTACATATGTCCATTGCAAAGCTGGGCGTGGTCGCAGCACAACTGTTGTTATATGTTACCTGGTGCACCACAAGTATATGACACCCAGTGCCGCCTATGATTATGTAAAGTCAATTCGACCAAGGGTTCTTCTGGCTTGCTCTCAGTGGCAAGCTGTTCAGGAATATTACCATCTTAGGGTTAGGAAAGCTATGGCCTATGTTCCCTTAGCCGACTTGCTAATGAAGGCACCTGCAGCAGCAACTTCACTAGACCTTGTAAAATTTGATGACGGTTCAGTAGTTGTTGTGACGGAGTCAGATCTGGAAGGTTATGACCCCTCTTTGGGGAGGGAGATGTGGGCAAATGTGAGTTTGGTTTACCGGGTGCGGGTTGCCGGTCAGGCAGCCTTTGCAAGAATATCTTGCTTTTGGCTGAGATATGGTGGCCCCCAGGAGGTTTCCAAGGACAATCATTTGGGAGGCATTAGTGTTGATATTCATGTCTACTGA 933 0.4609 MHLEELKGEEVGGGEEGKLYLGSSFVGSDAKRALVGAGARALFYPTLFYNVVRNKIQSEFRWWDKVDEFILLGAVPFPIDVPRLKELGVRGVITLNESYETLVPSSLYHDHGIDHLVIPTRDYCFAPSLHDICSAVDFIHENALAGRVTYVHCKAGRGRSTTVVICYLVHHKYMTPSAAYDYVKSIRPRVLLACSQWQAVQEYYHLRVRKAMAYVPLADLLMKAPAAATSLDLVKFDDGSVVVVTESDLEGYDPSLGREMWANVSLVYRVRVAGQAAFARISCFWLRYGGPQEVSKDNHLGGISVDIHVY 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g1574 310 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 54 206 IPR029021 -
Mibi12g1574 310 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 130 198 IPR000387 GO:0016311|GO:0016791
Mibi12g1574 310 SMART ptp_7 104 209 IPR003595 -
Mibi12g1574 310 FunFam Dual specificity phosphatase domain protein 62 209 - -
Mibi12g1574 310 ProSiteProfiles Dual specificity protein phosphatase domain profile. 62 209 IPR020422 GO:0006470|GO:0008138
Mibi12g1574 310 Pfam Dual specificity phosphatase, catalytic domain 84 204 IPR000340 GO:0008138|GO:0016311
Mibi12g1574 310 PANTHER PHOSPHATIDYLINOSITOL PHOSPHATASE 15 286 - -
Mibi12g1574 310 Gene3D Protein tyrosine phosphatase superfamily 62 210 IPR029021 -
Mibi12g1574 310 CDD PTPMT1 62 204 IPR044596 GO:0004721
Mibi12g1574 310 ProSitePatterns Tyrosine specific protein phosphatases active site. 151 161 IPR016130 GO:0016311|GO:0016791
Mibi12g1574 310 SMART dsp_5 65 206 IPR020422 GO:0006470|GO:0008138
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g1574 Mibi-ChrMibi12 31592612 31595460 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g1574 9 310 Protein tyrosine phosphatase (PTP) family AT2G35680 61.635 3.13e-133 380