Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g1561 ATGCTTATCCACCCCAGTATTATAAGTTTATTGTTCGGATTGAAAATGGTGAAGATAGAATTTGGTAGCTTTCCTGATTCATTTAGCGTAAATTCCATTAAGGCTTATGTAGCAGAGTTCATTGCCACTCTTCTTTTCGTCTTTGCTGGAGTTGGATCAGCCATTGCTTACGGTGAACTTACGAAGGATGCACCGTTGGATGTGGCGGGGCTGGTTGCGGTGGCGGTGGCGCATGCATTTGGGTTGTTTGTAGGGGTGGCGGTGGCGGCCAACATCTCAGGCGGCCACTTGAACCCGGCGGTTACTTTTGGATTGGCAATTGGAGGCAACATAACCATATTAACTGCCATCTTCTACTGGATTTTCCAATTGCTTGGCTCCATAGTCGCATGTCTCCTCCTCAAGTTTGTTACTGGTGGCAAGAGCATTCCAACACATGGACTAGCAGCGGGAGTGGGTGCAGGAGAAGGAGTAGTGTTTGAGATTATTGTGACTTTTGCATTGGTTTACACTGTGTATGCCACAGCTGCTGATCCCAAGAAGGGTTCTCTTGGCACCATTGCACCTATTGCAATTGGGTTCATTGTGGGTGCCAACATCTTGGCTGCCAGTCCATTTAGTGGCGGTTCAATGAACCCAGCTCGCTCGTTCGGCCCGGCCGTGGTCAGCGGCAACTTCGTGGATAACTGGATTTACTGGGTTGGACCATTGGTCGGTGGGGGTTTGGCCGGGTTGGTCTATGGCGACGTTTTCATTGGTTCATATGCTCCAGTTCCTGCTGCTGAAAGCTACCCTTAA 798 0.4937 MLIHPSIISLLFGLKMVKIEFGSFPDSFSVNSIKAYVAEFIATLLFVFAGVGSAIAYGELTKDAPLDVAGLVAVAVAHAFGLFVGVAVAANISGGHLNPAVTFGLAIGGNITILTAIFYWIFQLLGSIVACLLLKFVTGGKSIPTHGLAAGVGAGEGVVFEIIVTFALVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAASPFSGGSMNPARSFGPAVVSGNFVDNWIYWVGPLVGGGLAGLVYGDVFIGSYAPVPAAESYP 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g1561 265 CDD MIP 34 247 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mibi12g1561 265 FunFam Probable aquaporin TIP1-1 17 263 - -
Mibi12g1561 265 TIGRFAM MIP: MIP family channel proteins 38 247 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mibi12g1561 265 Gene3D Glycerol uptake facilitator protein. 17 256 IPR023271 -
Mibi12g1561 265 PRINTS Major intrinsic protein family signature 34 53 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mibi12g1561 265 PRINTS Major intrinsic protein family signature 78 102 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mibi12g1561 265 PRINTS Major intrinsic protein family signature 193 215 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mibi12g1561 265 PRINTS Major intrinsic protein family signature 160 178 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mibi12g1561 265 PRINTS Major intrinsic protein family signature 230 250 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mibi12g1561 265 PRINTS Major intrinsic protein family signature 115 134 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mibi12g1561 265 Pfam Major intrinsic protein 29 247 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mibi12g1561 265 ProSitePatterns MIP family signature. 96 104 IPR022357 -
Mibi12g1561 265 PANTHER AQUAPORIN-8 19 253 IPR034294 -
Mibi12g1561 265 SUPERFAMILY Aquaporin-like 28 253 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g1561 Mibi-ChrMibi12 31437857 31439722 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g1561 16 262 Major Intrinsic Protein MIP AT5G47450 80.162 3.70e-137 385