Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g1547 ATGCCTATTATAATGGCTTCTTTGTTCTCCTCATTGATTGTGGTTTCTGTTTTGTTGCTGCTGTTTCATGCAGAAACAGTGAGATGCAGTACAGCCTCTTCCGACGATAACACCCCGACCTCACCACCACCACCACCACCAGTGTCTTCCACAAACTCCTCGTCATCATCGAAGCACCGTCACCAGTGGGTGGGGCCCATCGGCCACCGTGTAATCACGGTGGACGTGAATGGCACAGGGCAGTTCAGATCCGTGCAAGCCGCCGTAGATGCTGTCCCAGACAATAATCGAATGAACGTCCTCATTAATATTAGTGCTGGTTGCTACATAGAGAAGGTTGTGGTGCCGGCGACGAAGCCATACATAACGTTTCAGGGAGCGGGGAGGGATGTGACGGTGATAGAATGGCATGACAGGGCCAGTGATCCTGGTCCCAATGGCCAACAGCTACGTACTTACAGAACTGCTTCTGTTACTGTCTTCGCCAACTATTTCTCTGCCCGCAATATCAGCTTTAAGAACACGGCGCCGGCGCCGATGCCGGGAATGGAGGGGTGGCAGGCGGCGGCGTTTAGGATATCAGGGGACAAGGCCTACTTCTCAGGATGCGGCTTCTACGGCGCCCAAGACACTCTCTGTGACGACGCCGGCCGCCATTACTTCAAGCATTGCTACATCCAAGGTTCCATTGATTTCATCTTCGGCAATGGCCGCTCCATCTACAAGGATTGTGTGGTGCACTCTATAGCGACCAAGTTCGGGTCCATAGCGGCCCACAAGAGAAAACACGAAGACGAGAAGACGGGCTTTGCTTTCGTACGGTGCAGGGTCACGGGTACGGGCCCAATCTACGTGGGTCGGGCGTTGGGCCAGTACTCCAGGATTGTCTACGCTTATACGTATTTCGACGACATTGTTGCACAAGAAGGTTGGGACGACTGGAACCACGTGGACAACAAAAACAAGACTGTGTTCTTTGGAGTGTATAAGTGCCGGGGCCCAGGAGCCGCGGCGGCGCGTGGGTTGTCATTGGCGCGTGAGCTTGACTTTGAATCTGCCCACCCATTTCTCGTTAAGAGCTTTGTCAATGGCAGACACTGGATTGCACCTTCTGATGCTTGA 1122 0.5339 MPIIMASLFSSLIVVSVLLLLFHAETVRCSTASSDDNTPTSPPPPPPVSSTNSSSSSKHRHQWVGPIGHRVITVDVNGTGQFRSVQAAVDAVPDNNRMNVLINISAGCYIEKVVVPATKPYITFQGAGRDVTVIEWHDRASDPGPNGQQLRTYRTASVTVFANYFSARNISFKNTAPAPMPGMEGWQAAAFRISGDKAYFSGCGFYGAQDTLCDDAGRHYFKHCYIQGSIDFIFGNGRSIYKDCVVHSIATKFGSIAAHKRKHEDEKTGFAFVRCRVTGTGPIYVGRALGQYSRIVYAYTYFDDIVAQEGWDDWNHVDNKNKTVFFGVYKCRGPGAAAARGLSLARELDFESAHPFLVKSFVNGRHWIAPSDA 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g1547 373 Gene3D - 68 372 IPR012334 -
Mibi12g1547 373 Pfam Pectinesterase 72 364 IPR000070 GO:0030599|GO:0042545
Mibi12g1547 373 MobiDBLite consensus disorder prediction 31 62 - -
Mibi12g1547 373 FunFam Pectinesterase 67 370 - -
Mibi12g1547 373 SUPERFAMILY Pectin lyase-like 69 370 IPR011050 -
Mibi12g1547 373 ProSitePatterns Pectinesterase signature 2. 226 235 IPR033131 -
Mibi12g1547 373 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 64 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g1547 Mibi-ChrMibi12 31326095 31328743 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g1547 5 373 Carbohydrate Esterase AT5G47500 70.588 0.0 534