Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g1534 ATGGAGTTTATGTTTACAGTTTTGCTTAAAAAGCAGGGAAAGCCTGCGAAGGCAGCGGGTGCTCGAAACAGGAACATTGTGTTGCCTGCAAAACGTGATTGCCAAGCCACCAACGAAACGCTCGGTTTGTTTGTTGAGAGCTGGTTTTATTATTGGGTATTAGCAATTCTGGAAGCACTGTTGAGCTTAATTGACCGAGTGTTGATTCGCTGCAAAAGGTTTAAGATGGGGTGTCATTTTTCCAAGTTCTCAACATGCTGCTCGGGTACAGAGCAAAGTGGTCCAGTTCCTGAAGCAAACATTAACGAAAATGAAGATAATAATGAGGCCACTGATGTGCCACCATTTCAAGAATATACAATTGATCAGCTTAGGAAGGCTACTTCTGGATTTGCTGTTGAGAATATAGTTTCTGAGCATGGAGAAAAGGCTCCAAATGTGGTTTATAAAGGGAAACTGGATAATCAAATGCGAATTGCTGTCAAACGGTTTAATAGATCGGCCTGGCCTGATGCCCGACAATTTTCGGATGAAGCCAGGGCTGTTGGACATCTAAGGAACGAAAGATTGGCAAATCTACTTGGATGTTGCTGCGATGGTGATGAGAGGTTACTTGTTGCAGAATATATGCCTAATGATACTCTGGCAAAGCACTTGTTCCACTGGGAAACTCAGCCCATGAAGTGGGCGATGCGACTAAGAGTTGCTTTATACCTTGCCCAAGCGCTAGAATATTGCACTAGCAGAGGACGTGCGCTATATCATGATCTAAATGCTTATAGAGTACTTTTTGATGATGAAGGAAATCCTAGACTCTCTTGCTTTGGTTTGATGAAAAACAGTAGGGATGGTAAAAGTTACAGTACAAACCTGGCATTTACTCCACCTGAGTATCTAAGGACAGGTAGAGTGACTCCTGAAAGTGTAACATACAGTTTTGGAACCCTTTTGCTTGACCTTCTCAGTGGGAAGCATATTCCTCCAAGTCATGCACTTGACCTGATTCGAGACAGGAACCTTCAGATGCTGACAGATTCTTGTTTAGAAGGACAATTTTCAAATGATGAGGGCACTGAATTAGTGCGCTTGGCTTCACGATGTTTACAATTAGAACCCCGGGAGCGTCCTTATCCAAAGTCTTTGGTTTCTGCTTTAATACCTCTACAGAAGGATTCTGAGGTTCCTTCTCATGTTTTGATGGGTATACCGCATGGCACAAATGCTTTACCACTTTCACCATTGGGTGAGGCGTGTCTAAGAATGGATTTGACTGCCATCCATGAGGTCCTTGAAAAACTTGGGTACAAAGATGATGAGGGTGCTGCTACTGAGCTCTCTTTTCAAATGTGGACCAACCAGATGCAGGAAACATTGAACTCAAAGAAGAAGGGTGATTCTGCTTTTCGTCATAAAGACTTCAAAGCTGCAATTGATAGCTATACTCAGTTCATTGACGTTGGAACTATGGTTTCTCCAACTGTTTATGCTCGCCGCAGTCTGTCTTATCTCATGAACAACGTGCCAGAAGAAGCACTGAAAGATGCATTGCAGGCACAAGTAGTTTCTCCTGTTTGGCATATAGCTTTCTACTTACAAGCTGTGGCACTTCTTGCATTGGGCAGGGAAAATGAGGCTCAGGTGGCACTTAAAGAGGCTTCCTCACTTGAAAGTAAAAAGAACACAAATTAA 1689 0.4298 MEFMFTVLLKKQGKPAKAAGARNRNIVLPAKRDCQATNETLGLFVESWFYYWVLAILEALLSLIDRVLIRCKRFKMGCHFSKFSTCCSGTEQSGPVPEANINENEDNNEATDVPPFQEYTIDQLRKATSGFAVENIVSEHGEKAPNVVYKGKLDNQMRIAVKRFNRSAWPDARQFSDEARAVGHLRNERLANLLGCCCDGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALYLAQALEYCTSRGRALYHDLNAYRVLFDDEGNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVTYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFSNDEGTELVRLASRCLQLEPRERPYPKSLVSALIPLQKDSEVPSHVLMGIPHGTNALPLSPLGEACLRMDLTAIHEVLEKLGYKDDEGAATELSFQMWTNQMQETLNSKKKGDSAFRHKDFKAAIDSYTQFIDVGTMVSPTVYARRSLSYLMNNVPEEALKDALQAQVVSPVWHIAFYLQAVALLALGRENEAQVALKEASSLESKKNTN 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g1534 562 FunFam probable serine/threonine-protein kinase At4g35230 455 562 - -
Mibi12g1534 562 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 92 560 IPR045845 GO:0004672|GO:0009742
Mibi12g1534 562 Gene3D Phosphorylase Kinase; domain 1 104 209 - -
Mibi12g1534 562 SUPERFAMILY TPR-like 461 557 IPR011990 GO:0005515
Mibi12g1534 562 Gene3D Tetratricopeptide repeat domain 451 562 IPR011990 GO:0005515
Mibi12g1534 562 ProSiteProfiles Protein kinase domain profile. 134 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi12g1534 562 SUPERFAMILY Protein kinase-like (PK-like) 107 395 IPR011009 -
Mibi12g1534 562 FunFam probable serine/threonine-protein kinase At5g41260 211 402 - -
Mibi12g1534 562 Gene3D Transferase(Phosphotransferase) domain 1 211 402 - -
Mibi12g1534 562 FunFam probable serine/threonine-protein kinase At4g35230 106 209 - -
Mibi12g1534 562 Pfam Protein tyrosine and serine/threonine kinase 147 384 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g1534 Mibi-ChrMibi12 31218694 31228331 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g1534 91 385 Glycoside Hydrolase AT3G07070 34.056 2.07e-41 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Mibi12g1534 PK_Tyr_Ser-Thr 3.6e-25 CL0016