Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g1530 ATGCAGTTGGAACAAAAAGAACAGGGAAAAAGTAGAATTGACAGCTTAAATGGTTATCCCGATGATGCCAACCTAATAGAATCTTTTGGAGCCAGCCAGCTGGAATATGTAGTGAAGTGGATAAATAATGTGCTTCCTCAGTTAAATATACCCATTGAAACTTCAGAGGAGGAACTGAGGGCATTGCTGAGGGATGGATCTGTATTATGCAGCATTTTGAACAAGCTGATTCCTGGATCAGTGGAAGTAGGAGGTTACTCTCTGGATGAGCAAGTGAATGTCAAAAGGTTTCTGCGGGCTATGGATGAACTGGGATTGCCTGGATTTGAATTGTCAAGGCTAGAGCAGGGATCGATAGGGCCTGTATTGCAATGCCTTGAGACTCTGAAAACTCATTTTGCTTCAAATGTTGAGAGAGAAAATATTGAAAGTCTTTCCAGAAAGAGGTGGGATCAATCAGATCTATCATACTTGGACTATGGAGGTGAAGATAGGCTAAAATTTTCAGGTGATTCAAATTTCAAACATGAAGTTGAGGGTTCTTTCACATCAGATGAAGCTACACATCATGTTGGATCTAGGTCTAAAGAACTCTTGCAGTTGAAACGAGGGTTGCAGGTGGATCTTTCTGATGATAAAATTAAAGAGTTACTCAAATCAAACAGTTTAGATAATGCCTCGACTCAGTCACTTTTTAACATAGGAAATAGGATTATGGGTGAAATCTTTGGAAGCAAGAATGGAGATGTGCCTCAATATGCGGCATTGTTGTTGAGAAAAATTCTTCAAGCGATAGAGTGGCGCTTTTCTAATCAATCAGAAAGCCTGAAAAATCAAAACAATCTTTTCAAGGTTCGTGAGGAGAGGTACCAATTGAAAATAAATGCACTTGAAACCCTAGCAGCAGGGATAACTGAAGAGAACGAGTTTGCCCTTCAAGTTGAGAAAAATAAAATGGAGAAAAACAGACTTGATGAGAAGGATGTTGCTCATTTAAAACAAGAAAAAGTCCGTTCCGAAATTGAGATTTCTACATTGAAGCAAGAATTGGAAATGGTCAAAAAAGCACATGATGAGCTCCGTATGCAGTCAGAATTACGTGCTGAAGAATGCAAATCTGAATATGAAAAGAGGATACGGGAACTAGAATGTAATCTTGCTGATGCAAGGAATCAAGCCGAGAAATTGGAGGCATTTATAGAATCTAAATCTGTTAAATGGAAGAACAAAGAGAATACCTATCAAAGTTTCATTAATAACCAATTTGGAGCATTTCAGGAATTGAGAGCTGTGATGGAATCCCTAAAAGAAGATGTGCTAAAAACCAAAAGAAGCTACTCAGAAGAATTCAAGTATTTGGGGATGAAGCTCAAAAGTCTAGCTGAAGCTGCTGAAAATTATCATGTAGTTCTTACAGAAAATCGGAAGTTATATAATGAAGTTCAAGATTTAAAAGGAAATATCCGGGTATATTGTCGAATAAGACCCTTTCTTCCCGGGCAAAGTCAAAACCATACAACCATTGAATTAATTGGTGATAATGGAGAATTAGTTGTCAGCAATCCTCTCAAACAAGGAAAAGAGAGCCGTGGTCAAGCAAAGACCCTCATGTTTGTACAGCTTAACCCTGACACTGCTTCATATTCTGAAACGATAAGCACCTTGAAGTTTGCCGTGAGGGTTTCAGGTGTTGAGTTAGGTGCTGCTCGTAGTAATAGAGAGGGAAGGGATGTCAAAGAACTCTTGGAGCAGGTAACATCTCTCAAAGATGCACTTACAAGGAAGGATGAAGAGATTGAGCGGTTGCAGCAGCTCAAGGCTAATCTCAATGTTGCCAAGCGTGGGATTATGATGTATGGCGCATCATCTCCCAGGAGACATTCCAATGGAGCTTCGAGGCATAGCACAAGACTTTCTGGAGCTGGGGCCATGCGAGGCGGTGAAAAAACACATTCTGACATGGACAACTGCTCAGAATATAGTGATAAGCATTCAGAAGCTGGTTCTCATCAGTCAATGGATGATCTCAGGAACAAGTCCAGTTCCTCGCTGTTCAAATCATCCATAGAAGATACAGGCCAAAATAATGACAATGACGACATTGATCTCTTACGATTTGGAGATGCAGATTCTGAAGAGAGATTAAGTGATATATCTGACAGTGGTCTTTCAATGGGAACGGAAACTGATGGCTCTATCTGCAGCATTGTGGAGTACGCTCTTTTCCCTGAAGCGGAGAAGGAGAAGCCGGCTGAAATTACCCAAACTAACATCACAACAACAGACAACCTGTCAACTGTAAACAAAGAGAAATCCACTTTGGCGTCCAAGATTCCCAAAGCCCCAGTTGTACAAAAAGGACCAATGAAATCTTCTAGGTTATCAATGAACAGAAGTTCCTCAAAGATTTCCTCTAGCCCCAAGAAAACTGCTGCCGGTGGCTCAACTTCAGTGAAGGCCTCTACTAAACGATGGCAATAA 2481 0.4051 MQLEQKEQGKSRIDSLNGYPDDANLIESFGASQLEYVVKWINNVLPQLNIPIETSEEELRALLRDGSVLCSILNKLIPGSVEVGGYSLDEQVNVKRFLRAMDELGLPGFELSRLEQGSIGPVLQCLETLKTHFASNVERENIESLSRKRWDQSDLSYLDYGGEDRLKFSGDSNFKHEVEGSFTSDEATHHVGSRSKELLQLKRGLQVDLSDDKIKELLKSNSLDNASTQSLFNIGNRIMGEIFGSKNGDVPQYAALLLRKILQAIEWRFSNQSESLKNQNNLFKVREERYQLKINALETLAAGITEENEFALQVEKNKMEKNRLDEKDVAHLKQEKVRSEIEISTLKQELEMVKKAHDELRMQSELRAEECKSEYEKRIRELECNLADARNQAEKLEAFIESKSVKWKNKENTYQSFINNQFGAFQELRAVMESLKEDVLKTKRSYSEEFKYLGMKLKSLAEAAENYHVVLTENRKLYNEVQDLKGNIRVYCRIRPFLPGQSQNHTTIELIGDNGELVVSNPLKQGKESRGQAKTLMFVQLNPDTASYSETISTLKFAVRVSGVELGAARSNREGRDVKELLEQVTSLKDALTRKDEEIERLQQLKANLNVAKRGIMMYGASSPRRHSNGASRHSTRLSGAGAMRGGEKTHSDMDNCSEYSDKHSEAGSHQSMDDLRNKSSSSLFKSSIEDTGQNNDNDDIDLLRFGDADSEERLSDISDSGLSMGTETDGSICSIVEYALFPEAEKEKPAEITQTNITTTDNLSTVNKEKSTLASKIPKAPVVQKGPMKSSRLSMNRSSSKISSSPKKTAAGGSTSVKASTKRWQ 826
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g1530 826 SMART ch_5 33 129 IPR001715 GO:0005515
Mibi12g1530 826 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 448 520 IPR027417 -
Mibi12g1530 826 MobiDBLite consensus disorder prediction 621 681 - -
Mibi12g1530 826 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 531 602 IPR027417 -
Mibi12g1530 826 ProSiteProfiles Calponin homology (CH) domain profile. 31 134 IPR001715 GO:0005515
Mibi12g1530 826 Gene3D - 29 137 IPR036872 -
Mibi12g1530 826 MobiDBLite consensus disorder prediction 781 826 - -
Mibi12g1530 826 Pfam Calponin homology (CH) domain 35 133 IPR001715 GO:0005515
Mibi12g1530 826 Pfam Microtubule binding 472 501 IPR031852 GO:0008017
Mibi12g1530 826 MobiDBLite consensus disorder prediction 790 826 - -
Mibi12g1530 826 MobiDBLite consensus disorder prediction 648 673 - -
Mibi12g1530 826 Coils Coil 329 363 - -
Mibi12g1530 826 PANTHER KINESIN-LIKE PROTEIN KLP-3 531 775 - -
Mibi12g1530 826 Coils Coil 365 399 - -
Mibi12g1530 826 Coils Coil 578 615 - -
Mibi12g1530 826 Gene3D Kinesin motor domain 530 606 IPR036961 -
Mibi12g1530 826 SUPERFAMILY Calponin-homology domain, CH-domain 31 133 IPR036872 -
Mibi12g1530 826 Gene3D Kinesin motor domain 428 529 IPR036961 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g1530 Mibi-ChrMibi12 31189448 31198853 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g1530 367 527 Calmodulin-binding Proteins AT5G65930 28.571 3.66e-07 52.4