Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g1514 ATGGAGTTGAAGTCGTCTCATGTGTCACCTGTTCTAACCGAACCTGTTCCTGTGAACAAGTCAAGACTAGGAATCCATTCTAGTGTGTTAAGTTATTCCCAGCAGGATCCAACCCCTGCTTCTCCAGGCAAGTACACAAGAACCAGTTCGAGAAAAAGTGTTGGCAATCTCGATGATGTTCGTTCCAATGGATGGCTAGAAGCCATGAAAGCTTCCTCACCCCCGAGAAAGAAGCTGGTTAAGTGTTCTAATAACACTCAGGTCACTTATTTGGATTCTGATAATGATGACTATCACTCATGGATGCTTGATTATCCATCCGCACTGGATGCTTTTGATAAACTTATTGAACGTGCAAAGGATAAGAAGATTGCCATGTTTCTGGATTATGATGGGACTCTTTCCCCAATTGTGGACGATCCAGCTTGTGCCTTTATGTCCGAACCTATGCGGGCAACGGTGAGAAGTGTGGCAAAGTATTTCCCCACGGCAATCATTAGTGGAAGGAGCCGTGATCAGGTTTATGATTTAGTAAAATTAAAGGAACTGTACTATGCTGGAAGTCATGGGATGGACATCATTGGCCCTGCCTCTGAAACTCTGTTCAGCAACCATCCAAATTGTGTGAAATCTACCGACCAACAGGGGAAGGAAATAACTGTGTTTCAACCCGCAAAAGAATTCCTGCCTATGATCGACGAGGTTTTTGGAACCCTCGTCGAGATAACTAAAGATATAAAAGGTGCACAGGTTGACAATCACAAGTTTTGCGTCTCTGTACATTATCGTAATGTAGATGAGAATAATTGGATAACAGTGGGACAACGTGTCCACGACATGTTAAAAAACTACCCACGTTTACGTTCAACACACGGACGTAAGGTTTTAGAGGTGCGTCCGGTGATTGATTGGGACAAAGGAAAAGCAGTTGAGTTTCTACTCGAGTCTCTGGGGTTAAGTGAGAGGGAGGATGTGATTGCCATATACATAGGGGACGATAAGACAGATGAAGATGCATTTAAGGTGTTGAGGGAGAAGAAGAGAGGATATGGCATTGTGGTGTCTTCGGTCAGGAAAGAGAGCAATGCCTTTTACTCTCTTAAGGACCCTTCTGAGGTCATGAAATTTCTGCAGCTTCTTGTCAACTGGAAGAGGCAACAACAACAAGACGAGAACCACCATAAGCAACAATCTCTATCTCTTGGCATTTGGTTTTGA 1218 0.4368 MELKSSHVSPVLTEPVPVNKSRLGIHSSVLSYSQQDPTPASPGKYTRTSSRKSVGNLDDVRSNGWLEAMKASSPPRKKLVKCSNNTQVTYLDSDNDDYHSWMLDYPSALDAFDKLIERAKDKKIAMFLDYDGTLSPIVDDPACAFMSEPMRATVRSVAKYFPTAIISGRSRDQVYDLVKLKELYYAGSHGMDIIGPASETLFSNHPNCVKSTDQQGKEITVFQPAKEFLPMIDEVFGTLVEITKDIKGAQVDNHKFCVSVHYRNVDENNWITVGQRVHDMLKNYPRLRSTHGRKVLEVRPVIDWDKGKAVEFLLESLGLSEREDVIAIYIGDDKTDEDAFKVLREKKRGYGIVVSSVRKESNAFYSLKDPSEVMKFLQLLVNWKRQQQQDENHHKQQSLSLGIWF 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g1514 405 SUPERFAMILY HAD-like 125 385 IPR036412 -
Mibi12g1514 405 CDD HAD_TPP 125 375 - -
Mibi12g1514 405 Pfam Trehalose-phosphatase 127 371 IPR003337 GO:0003824|GO:0005992
Mibi12g1514 405 Gene3D - 124 212 IPR023214 -
Mibi12g1514 405 Gene3D - 235 397 IPR023214 -
Mibi12g1514 405 MobiDBLite consensus disorder prediction 32 57 - -
Mibi12g1514 405 FunFam Trehalose 6-phosphate phosphatase 231 390 - -
Mibi12g1514 405 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 40 392 IPR044651 GO:0004805|GO:0005992
Mibi12g1514 405 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 126 344 IPR006379 -
Mibi12g1514 405 TIGRFAM T6PP: trehalose-phosphatase 122 381 IPR003337 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g1514 Mibi-ChrMibi12 30992535 30994588 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g1514 120 380 Trehalose Biosynthesis Gene Families AT1G70290 25.725 8.46e-09 55.8