Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g1507 ATGTCATCATCCTCATCTTCTACTGCCTTATCGCTGGACCACCTCCCTCCTTCCGAGCAGCTTTGTTATGTCCAATGCAATATTTGTGACACTGTCCTCGCTGTGAGTGTTCCTTGCAGCAGTTTGTTCAAGACTGTGACGGTGAGATGCGGTCATTGCACCAACCTCCTGCCGGTTAATGTTAACGTGCGTGGGTTGCTGCTTCCTTCAGCAAACCAATTTCATCACTTGACTCACTCCTTCTATTCTCCACCTCACAATCTTCTGGAAGAGATACCAAACCCATCCCCAAATTTCTTGATCAATCATCAGACCAACTCTTCCAATGACTTCTCTGTACCTTCCAGGACAACGCCGAATGAGCTTCCTCGCCCACCCCTCCTCAATAGACCTCCTGAGAAGAGACAGAGAGTCCCCTCCGCCTACAACCGATTCATTAAGGAGGAGATCCAACGCATCAAGTCTATCAATCCCGATATAAGCCACAGAGAAGCCTTCAGCGCAGCTGCCAAGAACTGGGCCCACTTCCCTCACATTCACTTTGGCCTCATGCCTGATCAGACCATGAAGAAGACAAATGTGCGCCAGCAGGAAGGAGAGGACGTCGTCCATATGAAAGATGGGTTTTTTGCTTCTGCTGCAAATGTTGGTGTTTCTCCCTACTAG 666 0.491 MSSSSSSTALSLDHLPPSEQLCYVQCNICDTVLAVSVPCSSLFKTVTVRCGHCTNLLPVNVNVRGLLLPSANQFHHLTHSFYSPPHNLLEEIPNPSPNFLINHQTNSSNDFSVPSRTTPNELPRPPLLNRPPEKRQRVPSAYNRFIKEEIQRIKSINPDISHREAFSAAAKNWAHFPHIHFGLMPDQTMKKTNVRQQEGEDVVHMKDGFFASAANVGVSPY 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g1507 221 FunFam Axial regulator YABBY 128 199 - -
Mibi12g1507 221 SUPERFAMILY HMG-box 127 176 IPR036910 -
Mibi12g1507 221 Pfam YABBY protein 17 183 IPR006780 GO:0007275
Mibi12g1507 221 MobiDBLite consensus disorder prediction 97 118 - -
Mibi12g1507 221 PANTHER PROTEIN YABBY 6-RELATED 1 195 IPR006780 GO:0007275
Mibi12g1507 221 MobiDBLite consensus disorder prediction 93 138 - -
Mibi12g1507 221 Gene3D High mobility group box domain 128 199 IPR036910 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g1507 Mibi-ChrMibi12 30886983 30889253 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g1507 28 219 C2C2-YABBY Transcription Factor Family AT4G00180 59.903 3.68e-68 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Mibi12g1507 YABBY 2.1e-69 CL0114
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi12g1507 12 30886983 30889253 Mibi12g1507 12 30886983 30889253 ECH