Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g1506 ATGAATACGTTTTCACATGTTCCTCCAGGCTTTCGGTTCCACCCCACAGATGAAGAACTTGTTGATTATTACCTAAGAAAAAAGATAGCCTCCAAAAGAATTGACCTAGATGTTATTAAAGATGTGGATCTCTATAAAATTGAGCCGTGGGATCTTCAAGGAGCGGAAGAACAAAACGAATGGTATTTCTTCAGCCACAAAGATAAGAAGTACCCAACTGGAACTCGCACCAATAGAGCTACAAAAGCAGGATTCTGGAAAGCTACAGGCAGAGACAAGGCAATCTACCGTAGGCACTGCCTCATTGGGATGAGAAAGACTCTTGTTTATTACAAGGGACGAGCCCCAAACGGTCAGAAGTCTGACTGGATCATGCACGAGTACCGACTTGAAACTAATGAAAATGGAACTCCTCAGGAAGAAGGTTGGGTTGTATGTAGAGTGTTCAAGAAGAAAATGACAAGTGTGCGGAGATTGGGAGAGTATGAGTCAGCATGCTGGTTTGAGGACCAAGTCTCGTTGATGCAAGAGCTTGAATCTGCACGACCAATTTCTCAACCTTATGCATCTACTAATTACCACCACCACCAACAACAATACTACGTACCTTGCAAGCAGGAACTTCAGTTGCAATATAACGTAAACCATAATCCCCACCATGAAGTTTTCCTTCAGCTTCCCCAACTTGAAAGCCCCAAAGTTCCTAATTACTCATCAGCAACCAGTTTGAGCTGCAATAATAATTCAACCGTCCCTACTTACGCCTATGATCACAGCAATAATGTTAATAATGGAAGTAGCTTGCAGCACTCACCCAATTCACTCACTCATCAGGAAGATCAGAACAATATGGCTTGTGGAAACAATGATAATGATCAAGTGACTGATTGGCGAGTTCTTGATAAATTTGTGGCTTCTCAACTTAGTAACCAGCAGCAGCAAGCTGATGCTTCCAGTGCAGAAGGGCTCCATGTGGATGGAACTAAAAGGCAAGAAATTGGGCAGCAGGAATATGCCTCCACCACATCAACCTCCAGTTGCCAAATTGACCTGTGGAATTGA 1062 0.4313 MNTFSHVPPGFRFHPTDEELVDYYLRKKIASKRIDLDVIKDVDLYKIEPWDLQGAEEQNEWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYRRHCLIGMRKTLVYYKGRAPNGQKSDWIMHEYRLETNENGTPQEEGWVVCRVFKKKMTSVRRLGEYESACWFEDQVSLMQELESARPISQPYASTNYHHHQQQYYVPCKQELQLQYNVNHNPHHEVFLQLPQLESPKVPNYSSATSLSCNNNSTVPTYAYDHSNNVNNGSSLQHSPNSLTHQEDQNNMACGNNDNDQVTDWRVLDKFVASQLSNQQQQADASSAEGLHVDGTKRQEIGQQEYASTTSTSSCQIDLWN 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g1506 353 MobiDBLite consensus disorder prediction 331 353 - -
Mibi12g1506 353 ProSiteProfiles NAC domain profile. 7 151 IPR003441 GO:0003677|GO:0006355
Mibi12g1506 353 FunFam Nac domain-containing protein 86 16 154 - -
Mibi12g1506 353 MobiDBLite consensus disorder prediction 258 291 - -
Mibi12g1506 353 Pfam No apical meristem (NAM) protein 8 130 IPR003441 GO:0003677|GO:0006355
Mibi12g1506 353 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 6 305 - -
Mibi12g1506 353 SUPERFAMILY NAC domain 5 151 IPR036093 GO:0003677|GO:0006355
Mibi12g1506 353 MobiDBLite consensus disorder prediction 333 353 - -
Mibi12g1506 353 Gene3D NAC domain 16 155 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g1506 Mibi-ChrMibi12 30874444 30876062 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g1506 1 351 NAC Transcription Factor Family AT1G62700 54.545 2.50e-132 382
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mibi12g1506 NAM 1.2e-37 No_clan