Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g1502 ATGGGAAGGCAACCTTGTTGTGATAAACTTGGTGTGAAGAAAGGACCATGGACTGCTGAGGAAGACAAGAAGCTCATCAACTTCATTCTCACCAATGGCCAGTGTTGTTGGCGAGCCGTCCCTAAACTCGCCGGCCTTCGTCGCTGCGGTAAAAGTTGCCGGCTTCGTTGGACTAATTATCTTCGTCCTGACTTAAAGAGAGGACTTCTCACTGAAGCTGAGGAGCAACTTGTTATTGACCTCCATGCCCGTCTTGGCAACAGGTGGTCCAAGATTGCTGCCAGATTACCAGGAAGGACGGACAATGAAATTAAGAATCACTGGAACACCCACATCAAGAAAAAGCTGCTTAAGATGGGTATTGATCCTGTTACTCATGAACCTCTTAACAATAAACAGCCTACAGCCTCCCAGGAAACAACTTCTTCCAATCAGAACAATCCACAGTCTGTAAATAATAATAGCAATCATCAGCTTAAGGAAACAGAGGGGGTCCTGAACTCCGAGGAGAATTCGAGCACATCCCCTGTTGAAAACTCTTCTAATTCTGGGGATGAGTCCCTTCTGCTAGACAGTATTTGCAGCGATGACTCCCTAATGAATAGCTTGTGGCTTGATGAAGCACCACTTGTGGATGCATTATGGGACAGTGAACCCAAAGTGCAGAACACTACTACTAATCATGACATGACCGTGCCTTTTTGGGAGGATAACTGTGCTTGGTTTTTGGACTGTCAGGACTTTGGTATTCATGATTTTGGTTTTAATTGTTTTAATGAAATTGAGTCTAATTCACTGCAAGCTTTAGGAATCGAGGGAAAGGATCACTAG 831 0.4465 MGRQPCCDKLGVKKGPWTAEEDKKLINFILTNGQCCWRAVPKLAGLRRCGKSCRLRWTNYLRPDLKRGLLTEAEEQLVIDLHARLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLLKMGIDPVTHEPLNNKQPTASQETTSSNQNNPQSVNNNSNHQLKETEGVLNSEENSSTSPVENSSNSGDESLLLDSICSDDSLMNSLWLDEAPLVDALWDSEPKVQNTTTNHDMTVPFWEDNCAWFLDCQDFGIHDFGFNCFNEIESNSLQALGIEGKDH 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g1502 276 FunFam MYB transcription factor 11 67 - -
Mibi12g1502 276 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Mibi12g1502 276 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Mibi12g1502 276 Gene3D - 71 116 - -
Mibi12g1502 276 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Mibi12g1502 276 CDD SANT 71 112 IPR001005 -
Mibi12g1502 276 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Mibi12g1502 276 MobiDBLite consensus disorder prediction 124 185 - -
Mibi12g1502 276 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Mibi12g1502 276 MobiDBLite consensus disorder prediction 128 185 - -
Mibi12g1502 276 SMART sant 13 63 IPR001005 -
Mibi12g1502 276 SMART sant 66 114 IPR001005 -
Mibi12g1502 276 CDD SANT 16 61 IPR001005 -
Mibi12g1502 276 FunFam MYB transcription factor 70 149 - -
Mibi12g1502 276 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Mibi12g1502 276 Pfam Myb-like DNA-binding domain 71 111 IPR001005 -
Mibi12g1502 276 Gene3D - 12 67 - -
Mibi12g1502 276 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g1502 Mibi-ChrMibi12 30819439 30820912 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g1502 1 255 MYB Transcription Factor Family AT4G22680 62.082 1.99e-103 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mibi12g1502 Myb_DNA-binding 2.9e-13 CL0123