Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g1489 ATGGAATCAAGAGATGGAATTAGCAGTGCAGTCACAGTGGTGGGATCAGATGATCCATCGGAGTACCATGTAGCTCACCGGAGCGAAAACCCAGCAACCACCGGCGGCGGCGGATCGACGGCGGCTCCGGCGGCTCAAGGGAGTGTTCCTCAGCCTCAGCCTCAGCCGCAGACGGCGGCGGTAGGGGCTACGCCGGCGACTATGACGATGCCGGGGAAGAAGAAAAGAGGTCGGCCGAGAAAGTACGGACCAGATGGGTCTGTGGCTATGGCTTTGTCTCCTAAACCGATATCTTCTTCGGCTCCACCACAAGTCATTGATTTCTCTGCAGATAAGCGCGGGAAAGTTCGTCCACCTAGTTCCGTCAGCAAATCCAAATTCGAGGTCGAGAATTTAGGTGAATGGGTTGCATGCTCCGTAGGTGCTAATTTTACACCCCATATAATCACTGTTAATGCCGGGGAGGACGTTACCATGAAGGTAATATCATTTTCTCAGCAAGGGCCTCGGGCTATATGTATTCTTTCTGCAAATGGTGTCATATCAAGTGTCACGCTTCGTCAACCTGATTCTTCTGGCGGCACATTGACCTATGAGGGACGTTTTGAAATTCTGTCATTATCTGGTTCCTTCATGCCAAGTGAAAGTGGGGGAGCACGGAGCAGATCTGGCGGTATGAGCGTTTCTTTGGCGAGTCCGGACGGTCGTGTTGTTGGTGGCGGAGTGGCAGGTCTATTAGTAGCAGCAAGTCCAGTGCAGGTAGTGGTAGGAAGCTTTCTGGCAGGAAACCAGCATGAGCAAAAGCCGAAGAAACAGAAAATCGAGGTGATATCCACAGCCATACCAACATCTGTTGTTCCCTTGTCTAGTGTCACTGATCCAGTCCCTCTCCTCACGTCTCCGTCTTCCTTCCGCGGTGACAGTTGGTCTGCAATTCCGGCAGATAACAGGAATAACGCCACCAATAATAGTAATAGTAACAACAACAACAATAATAAGTCAGCTGATATTAATGTCCCACCATCTGGAGGGTAA 1035 0.5082 MESRDGISSAVTVVGSDDPSEYHVAHRSENPATTGGGGSTAAPAAQGSVPQPQPQPQTAAVGATPATMTMPGKKKRGRPRKYGPDGSVAMALSPKPISSSAPPQVIDFSADKRGKVRPPSSVSKSKFEVENLGEWVACSVGANFTPHIITVNAGEDVTMKVISFSQQGPRAICILSANGVISSVTLRQPDSSGGTLTYEGRFEILSLSGSFMPSESGGARSRSGGMSVSLASPDGRVVGGGVAGLLVAASPVQVVVGSFLAGNQHEQKPKKQKIEVISTAIPTSVVPLSSVTDPVPLLTSPSSFRGDSWSAIPADNRNNATNNSNSNNNNNNKSADINVPPSGG 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g1489 344 CDD DUF296 145 236 IPR005175 -
Mibi12g1489 344 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 42 325 IPR039605 GO:0003680
Mibi12g1489 344 SUPERFAMILY AF0104/ALDC/Ptd012-like 143 263 - -
Mibi12g1489 344 Gene3D - 146 279 - -
Mibi12g1489 344 MobiDBLite consensus disorder prediction 302 344 - -
Mibi12g1489 344 FunFam AT-hook motif nuclear-localized protein 1-like 146 276 - -
Mibi12g1489 344 Pfam Plants and Prokaryotes Conserved (PCC) domain 146 259 IPR005175 -
Mibi12g1489 344 ProSiteProfiles PPC domain profile profile. 141 280 IPR005175 -
Mibi12g1489 344 MobiDBLite consensus disorder prediction 1 105 - -
Mibi12g1489 344 MobiDBLite consensus disorder prediction 32 64 - -
Mibi12g1489 344 MobiDBLite consensus disorder prediction 1 15 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g1489 Mibi-ChrMibi12 30655273 30658980 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g1489 1 339 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 58.774 1.80e-121 352