Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g1485 ATGGATCCAATGTCAGGACATGGGCAATCTCTTCCCCCACCATTCCATATGCACCATCAAGAACACCAATTCCAGTCTCTACACCAAAACACAGAAGAAGAACAAAGCGGGAGTAGCAGCGGCCTCAACCTTGCCGGAAAAAGAGAACGTGAAGAAACCAACAATAATACTTTCGATCAACTCAATATGAACGGAGGAGAAGGCGGAGAAATGACAAGAAGGCAAAGAGGAAGACCATCTGGATCCAAAAACAAGCCTAAACCACCCATCATCATCACCAGAGACAGCGCCAATGCCCTTAGAACACACGTCATGGAGGTCTCCGACGGCCACGACATCATCGACAGCGTCTCCTCCTTCGCCCGCCGCCGTCAGAGGGGCGTTTGTATCATGTCCGGCACCGGCACCGTCACCAACGTCACTCTCCGGCAGCCGGCTTCCTCCGGCGCCGTGGTTTCCCTCCACGGCCGGTTCGAGATCCTGTCGCTCGCCGGCTCCTTCCTGCCGCCGCCGGCCCCGCCGGCCGCTTCCGGCCTGACCATATACCTGGCCGGCGGGCAGGGTCAGGTGGTCGGTGGGACCGTCGTGGGGACGCTCGTGGCGGCGGGCCCGGTGGTGATCATGGCGGCGTCGTTTAGCAACGCCGCCTACGAGAGGCTCCCGTTGGAGGACGAGGACCCGGCGGCGCCGGCGATGACCGGAATGGGGTCTCCGGGCGGCGGAGTTGGGCAGCAGCAACAGTTGCTAGGGGAGGTAAGTACAGGTGGGCTAATGCATGCTTTGCCTCCAAATCTTGTGAATTCTATGCAGATGCCTTCTTCTTCTGATCATCAACCTTTCTGGGCTTCTCCTCGTCCTCCTTTTGGATGA 870 0.5862 MDPMSGHGQSLPPPFHMHHQEHQFQSLHQNTEEEQSGSSSGLNLAGKREREETNNNTFDQLNMNGGEGGEMTRRQRGRPSGSKNKPKPPIIITRDSANALRTHVMEVSDGHDIIDSVSSFARRRQRGVCIMSGTGTVTNVTLRQPASSGAVVSLHGRFEILSLAGSFLPPPAPPAASGLTIYLAGGQGQVVGGTVVGTLVAAGPVVIMAASFSNAAYERLPLEDEDPAAPAMTGMGSPGGGVGQQQQLLGEVSTGGLMHALPPNLVNSMQMPSSSDHQPFWASPRPPFG 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g1485 289 ProSiteProfiles PPC domain profile profile. 97 235 IPR005175 -
Mibi12g1485 289 Pfam Plants and Prokaryotes Conserved (PCC) domain 101 214 IPR005175 -
Mibi12g1485 289 FunFam AT-hook motif nuclear-localized protein 100 229 - -
Mibi12g1485 289 CDD DUF296 101 168 IPR005175 -
Mibi12g1485 289 PIRSF ESCAROLA 14 288 IPR014476 GO:0003680
Mibi12g1485 289 MobiDBLite consensus disorder prediction 29 43 - -
Mibi12g1485 289 Gene3D - 100 227 - -
Mibi12g1485 289 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 30 282 IPR014476 GO:0003680
Mibi12g1485 289 MobiDBLite consensus disorder prediction 261 289 - -
Mibi12g1485 289 MobiDBLite consensus disorder prediction 226 245 - -
Mibi12g1485 289 SUPERFAMILY AF0104/ALDC/Ptd012-like 97 227 - -
Mibi12g1485 289 MobiDBLite consensus disorder prediction 266 280 - -
Mibi12g1485 289 MobiDBLite consensus disorder prediction 1 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g1485 Mibi-ChrMibi12 30604913 30605782 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g1485 1 288 AT-hook Motif Nuclear Localized (AHL) Family AT4G22810 52.994 2.59e-82 249