Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g1484 ATGGGTTCTCACCAGAATGATGGCACAAGCTACCAGCCTACAGAGCCAAAGCCATGCGCAAACAACTGTGGCTTCTTTGGAACCGCCAGCACCATGAATCTCTGCTCTAAATGTTACAAAGACTTCCAAATCAAAGAGCAGCGAGCTGCTTCCGCTAAAGCCGTCATGGAGAAATCACTCAAACCTAGACCCGTTCTTGTTCATAATCAGACGCCGAAATCGGACTCTTCACCGCAATTCCTTTTTGGAACTGCCTCACCGCAATTTTTTATGGGAACTAGCTTGGAAGCTTTGCGTTCATCGTCCGGAGTTGTCGGCGGGGATCAGGTGCAGCGCTGTAGCAGTTGTAATAAGAAGGTTGGGCTGACTGGTTTTGCGTGTAAGTGTGGTGCCACTTTCTGCGGCACACATCGCTATCCGGAAAAGCATGATTGTAGCTATGATTTCAAGGATTCTGGGCGTGAAGCTATTGCCAAGGCTAATCCAGTGGTAAAGGCCCCAAAACTTGACAAGATCTAG 519 0.4855 MGSHQNDGTSYQPTEPKPCANNCGFFGTASTMNLCSKCYKDFQIKEQRAASAKAVMEKSLKPRPVLVHNQTPKSDSSPQFLFGTASPQFFMGTSLEALRSSSGVVGGDQVQRCSSCNKKVGLTGFACKCGATFCGTHRYPEKHDCSYDFKDSGREAIAKANPVVKAPKLDKI 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g1484 172 Pfam AN1-like Zinc finger 113 149 IPR000058 GO:0008270
Mibi12g1484 172 PANTHER AN1-TYPE ZINC FINGER PROTEIN 16 172 - -
Mibi12g1484 172 Gene3D - 4 64 - -
Mibi12g1484 172 Gene3D - 98 168 IPR035896 -
Mibi12g1484 172 SMART AN1_Zf_4 113 150 IPR000058 GO:0008270
Mibi12g1484 172 FunFam Zinc finger AN1-type containing 6 94 168 - -
Mibi12g1484 172 Pfam A20-like zinc finger 18 40 IPR002653 GO:0003677|GO:0008270
Mibi12g1484 172 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 19 63 - -
Mibi12g1484 172 ProSiteProfiles Zinc finger A20-type profile. 13 47 IPR002653 GO:0003677|GO:0008270
Mibi12g1484 172 SUPERFAMILY AN1-like Zinc finger 109 167 IPR035896 -
Mibi12g1484 172 SMART A20_3 16 40 IPR002653 GO:0003677|GO:0008270
Mibi12g1484 172 ProSiteProfiles Zinc finger AN1-type profile. 107 153 IPR000058 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g1484 Mibi-ChrMibi12 30586517 30587035 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g1484 13 172 C2H2 Transcription Factor Family AT3G52800 42.857 1.87e-36 122