Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g1480 ATGTTATCTTCGAGCATGAGAAAGCATCGTCAATTTCATCTCTCGCATGCTCTCTTGTGCTCTGTTCTTTGTCTTCTTTCTTCTATCATCACGGTCTCACCGGTGACTGAGAAGGAGATTTTGCTTCAATTTAAGGGTAACATTACAGATGATCCACAAAACAGCTTGAGCTCATGGGTTTCCAGTGGAAACCCTTGTGAAGATTATAATGGAGTTTTCTGTAACCCTGAAGGTTCTGTGGAAAGGATCGTACTGTGGAACACTAGTTTGGCTGGAGTATTGACTCAGGCTCTGTCAGGGTTGAAGTTTTTGAGGATTTTGACACTGTTTGGGAATCGTTTTTCTGGGAAGATTCCAGAAGAGTATGGTGACATTCACTCATTGTGGAAGATCAATTTGAGCTCCAATGCATTATCTGGTTCAATCCCAGAGTTCATTGGTGACTTGGAAAGTATCCGATTTCTGGATTTATCCAAGAATGACTTCACTGGGGAGATTCCTTCGGCTTTGTTTAGGCACTGTTACAAAACCAGGTTCATTTCTCTTTCTCATAACAGTCTTTCAGGTGTAATTCCAGCGTCATTGGCGAATTGCTTGAACCTTGAAGGGTTTGATTTTTCCTTCAACAATCTAAGTGGAGGTATCCCGTCTGGACTTTGTGACATTCCAAGGTTATCCTATATGTCCCTGAGAAGCAATGCCTTATCAGGAACAGTGAAAGAGAAGTTTGTGGGATGCCAAAGTTTGGCACTTATAGATCTTGGAGATAATACATTCACTGGTTCAGCCCCTTTTAGCATCATTGAAACGAAGAATCTTACTTATTTCAATGTATCGTATAATGGTTTTAGTGGACAAATTCCTGAGATCACTACCTGCAGTGAGAGATTACAAATTTTTGACGCTTCTGGGAATGCTTTGGATGGGGAGATTCCCTCTGGTATATCAGGATGCAAGAGCCTCAAGCTATTGGCTTTGGAGTCTAATAGGTTGAAAGGGACTATTCCATTAGGGACTAAAGATATGGGAAGTCTACTAGTTATTAAATTAGGTAATAATTCATTAAGTGGATCGATACCCAAGGGTTTTGGCAACATTCAGCTGCTTGAAGTCCTTGATTTGCATAATCTAAACCTTGTCGGTGGAATTCCCGAAGATATAAGCAATTGTAGATTCCTTCTAGAGCTGAATGTTTCAGGTAATAACTTAGAAGGAGAGGTTCCTCAGAACCTTAACAACTTAACATATTTGGAAGTCCTCGACCTACATCAAAATCAGCTCAATGGTAGCATCCCAACAAGCCTAGGAAACTTGTCAAAGATCCAATACCTAGATTTGTCACATAATTCACTTTCTGGTTCTATCCCTTCTTCCCTTGGGAATTTGAACAACCTGACACATTTTAATCTCTCATTTAACAATCTCTCTGGTGTCATTCCACCTATTGCATCCATACAGAGTTTTGGTCCTTCAGCATTTTCCAACAACCCTTACCTTTGTGGTGCTCCTTTGGACACCCTTTGCTCAGCAAATGGCACTGCAATACGGCCAAATTCTCGGAAGCCTAAACTAAGTGTCTCTGCAATTATTGCAATTGTTGCTGCAGCCGTGATTCTTATCGGGGTCTGTTTGGTGAGCATCATGAACATCAAGGCACGTAGTAGTAAGAAAAAAGATGAACAGATGATGATTGTTGAGAGTACACCCCTTGGATCGACAGAATCAAATGTTATAATAGGAAAGCTGGTTCTCTTCAGCAAAAGTTTACCATCCAAGTATGAAGACTGGGAGGCAGGTACCAAAGCATTGCTCGATAAGGAGTCCTTAATTGGGCGTGGATCCATCGGGACGGTCTACAGAACTGATTTTGAAGGTGGGATCTCAATTGCAGTGAAAAAGCTTGAGAGTCTGGGAAGAATTAGAAACCAGGATGAGTTTGAGCATGAAATTGGGCGAATAAGTAACCTTCAACACTCTAACTTAGTTGCCTTTCAAGGTTACTATTGGTCCTCCACAATGCAGTTGATTCTATCTGAGTTTGTCTCAAATGGCAACCTCTATGACAACCTACACGGCTTTGGTTACGCAGGAACCAGCACTAGCCGCGGCAACCGGGAACTAAACTGGTCTAGAAGGTACCGAATTGCAGTTGGAACTGCAAGAGCCCTTGCCTACCTTCACCATGACTGTCATCCTCCAATTCTTCATCTCAACATGAAGTCCTCAAATATACTCTTAGATGACAAGTACGAGGCAAAGTTGTGTGATTATGGGTTGGGGAAGTTGCTTCCCATTTTGGACAATTATGGTCTGACCAAGTTCCACAATTCTGTTGGATATGTTGCACCAGAGCTAGCTCAAAGTATGAGACCGAGTGAGAAATGTGATGTGTATAGTTTTGGGGTTATTCTTTTGGAGTTGGTCACAGGAAGGAAGCCAGTAGAAAGTCCAACAGCCAGTGAGGTTGTGGTTTTGTGTGAATATGTAAGAGGGTTATTGGAGACCGGATCAGCTTCCTTATGCTTTGATACGAGGTTGCTGGGTTTTGCAGAGAACGAGTTAATTCAGGTGATGAGATTGGGGCTTATTTGTACTTCCGAGGATGCTTCAAGGAGACCAAGTATGGCTGAGGTTGTGCAGGTTCTTGAATCTATTAGAAATGGATTGGAATCAAATTAA 2679 0.4188 MLSSSMRKHRQFHLSHALLCSVLCLLSSIITVSPVTEKEILLQFKGNITDDPQNSLSSWVSSGNPCEDYNGVFCNPEGSVERIVLWNTSLAGVLTQALSGLKFLRILTLFGNRFSGKIPEEYGDIHSLWKINLSSNALSGSIPEFIGDLESIRFLDLSKNDFTGEIPSALFRHCYKTRFISLSHNSLSGVIPASLANCLNLEGFDFSFNNLSGGIPSGLCDIPRLSYMSLRSNALSGTVKEKFVGCQSLALIDLGDNTFTGSAPFSIIETKNLTYFNVSYNGFSGQIPEITTCSERLQIFDASGNALDGEIPSGISGCKSLKLLALESNRLKGTIPLGTKDMGSLLVIKLGNNSLSGSIPKGFGNIQLLEVLDLHNLNLVGGIPEDISNCRFLLELNVSGNNLEGEVPQNLNNLTYLEVLDLHQNQLNGSIPTSLGNLSKIQYLDLSHNSLSGSIPSSLGNLNNLTHFNLSFNNLSGVIPPIASIQSFGPSAFSNNPYLCGAPLDTLCSANGTAIRPNSRKPKLSVSAIIAIVAAAVILIGVCLVSIMNIKARSSKKKDEQMMIVESTPLGSTESNVIIGKLVLFSKSLPSKYEDWEAGTKALLDKESLIGRGSIGTVYRTDFEGGISIAVKKLESLGRIRNQDEFEHEIGRISNLQHSNLVAFQGYYWSSTMQLILSEFVSNGNLYDNLHGFGYAGTSTSRGNRELNWSRRYRIAVGTARALAYLHHDCHPPILHLNMKSSNILLDDKYEAKLCDYGLGKLLPILDNYGLTKFHNSVGYVAPELAQSMRPSEKCDVYSFGVILLELVTGRKPVESPTASEVVVLCEYVRGLLETGSASLCFDTRLLGFAENELIQVMRLGLICTSEDASRRPSMAEVVQVLESIRNGLESN 892
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g1480 892 CDD STKc_IRAK 610 885 - -
Mibi12g1480 892 Gene3D Ribonuclease Inhibitor 178 511 IPR032675 -
Mibi12g1480 892 Gene3D Transferase(Phosphotransferase) domain 1 681 891 - -
Mibi12g1480 892 SUPERFAMILY L domain-like 172 505 - -
Mibi12g1480 892 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g12460 173 511 - -
Mibi12g1480 892 SMART LRR_typ_2 342 365 IPR003591 -
Mibi12g1480 892 SMART LRR_typ_2 149 173 IPR003591 -
Mibi12g1480 892 SMART LRR_typ_2 438 462 IPR003591 -
Mibi12g1480 892 SMART LRR_typ_2 414 437 IPR003591 -
Mibi12g1480 892 Pfam Protein kinase domain 606 880 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi12g1480 892 Pfam Leucine rich repeat 416 475 IPR001611 GO:0005515
Mibi12g1480 892 Gene3D Ribonuclease Inhibitor 35 175 IPR032675 -
Mibi12g1480 892 Pfam Leucine rich repeat N-terminal domain 37 75 IPR013210 -
Mibi12g1480 892 FunFam Putative LRR receptor-like serine/threonine-protein kinase 682 889 - -
Mibi12g1480 892 Gene3D Phosphorylase Kinase; domain 1 573 680 - -
Mibi12g1480 892 PANTHER OS05G0588300 PROTEIN 218 336 - -
Mibi12g1480 892 ProSiteProfiles Protein kinase domain profile. 604 885 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi12g1480 892 SUPERFAMILY L domain-like 56 211 - -
Mibi12g1480 892 SUPERFAMILY Protein kinase-like (PK-like) 605 883 IPR011009 -
Mibi12g1480 892 FunFam Putative LRR receptor-like serine/threonine-protein kinase 581 680 - -
Mibi12g1480 892 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g12460 34 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g1480 Mibi-ChrMibi12 30560016 30562786 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g1480 12 891 Receptor kinase-like Gene Family AT1G62950 64.382 0.0 1095
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Mibi12g1480 Pkinase 8.9e-35 CL0016