Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g1443 ATGAACACGTCTTCAACACGCGCCTTACTTAGCTTGCCGCTTGCTGTTCTAACTCATGACGCCCCCCAAGGCCACGTGTCAACTTATCCAAACTTCCATCTTTCGCTTTGCCACCACCTCCTTGAACCATTCCCAACAGCCAACTGTTCCCGTGTCCGTGTCCACCTCGTAGGCACGTTTGCTTCGCCCTCTCCTTTCACACCATCACACCCAAGTCCAACAACGCTAATCTATATAAACATCCCCACTTCCTTCCCTTCTCTCCTCACTCTCAAAAAAACAACATACATACATACACTCCCCACAAACCGAAAAATCTCTGAAATGAACATCTTAACAACTTTCACCACCAATTCAGACGGATCAAACTCTTCATCTCACTCCGACGAAGAACTACCCTCCATCACATTGGCGTCGGAGAAGCCGAAGAAGCGGGCGGGGCGTCGTGTTTTTAAGGAGACAAGGCATCCTGTGTACCGAGGAGTTCGTCGTAGGGACAAAGACAAGTGGGTTTGTGAGGTTCGTGTTCCTAACAACAACAAACTCAGAATCTGGCTTGGAACTCATAACACTCCTGAGAAAGCTGCCAGGGCCCATGACGTGGCAGCCCTCGCCCTACGTGGCAAGTCCGCTTGCCTCAATTTCGCCGACTCGGCTTGGCGGCTTCCCATCCCGGCCTCCACCGACCCCGACGTTATCCGGCGCGTCGCCATGGAGGCCGTAGAGGCCTTTGACGGCGATGAAGTTTGTAGCAGCACGGCAAGAATGGTAGAAGAAGAAGAAGCAGAAGCTAGTATTGTGAATAATTACAGTAATGATAATAATAACAATAATAATGGGGTTGGATTTGGGGTTTCGGAGTTTGGAGACGATGAGGTTTTGTTTAGTAGTATGGCGGATGAGCCGTTGAGATCCCCGCCGGCTGCTTATTCTTTGGGGACACAGGGATGGGACTGGAGGGATGAGGTGGACCAGGTGGATAGTGAGGTGTCACTTTGGAGCTTTACTATTTAA 1014 0.5039 MNTSSTRALLSLPLAVLTHDAPQGHVSTYPNFHLSLCHHLLEPFPTANCSRVRVHLVGTFASPSPFTPSHPSPTTLIYINIPTSFPSLLTLKKTTYIHTLPTNRKISEMNILTTFTTNSDGSNSSSHSDEELPSITLASEKPKKRAGRRVFKETRHPVYRGVRRRDKDKWVCEVRVPNNNKLRIWLGTHNTPEKAARAHDVAALALRGKSACLNFADSAWRLPIPASTDPDVIRRVAMEAVEAFDGDEVCSSTARMVEEEEAEASIVNNYSNDNNNNNNGVGFGVSEFGDDEVLFSSMADEPLRSPPAAYSLGTQGWDWRDEVDQVDSEVSLWSFTI 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g1443 337 MobiDBLite consensus disorder prediction 117 136 - -
Mibi12g1443 337 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 119 334 IPR045277 GO:0003700
Mibi12g1443 337 CDD AP2 159 218 IPR001471 GO:0003700|GO:0006355
Mibi12g1443 337 PRINTS Ethylene responsive element binding protein signature 159 170 IPR001471 GO:0003700|GO:0006355
Mibi12g1443 337 PRINTS Ethylene responsive element binding protein signature 182 198 IPR001471 GO:0003700|GO:0006355
Mibi12g1443 337 Gene3D AP2/ERF domain 158 217 IPR036955 GO:0003700|GO:0006355
Mibi12g1443 337 MobiDBLite consensus disorder prediction 117 133 - -
Mibi12g1443 337 ProSiteProfiles AP2/ERF domain profile. 158 216 IPR001471 GO:0003700|GO:0006355
Mibi12g1443 337 Pfam AP2 domain 157 208 IPR001471 GO:0003700|GO:0006355
Mibi12g1443 337 SMART rav1_2 158 222 IPR001471 GO:0003700|GO:0006355
Mibi12g1443 337 SUPERFAMILY DNA-binding domain 158 218 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g1443 Mibi-ChrMibi12 30022421 30024751 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g1443 135 335 AP2-EREBP Transcription Factor Family AT1G12610 51.429 3.04e-58 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mibi12g1443 AP2 3.9e-13 CL0081