Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g1442 ATGGAGAGGCCCCTGGTGGCAGAGATGGTACGAAGTGCCAAAATTATTCTGGGTTATCTTCCATTTCATCCTTGTGGAAATTCCACCTGTTTATCAGCTTTACGGAGAAACTTGGAGAATGTTTGCTTGGGATCAATAAGAACGCAGGCTCTAGAAACTGGACACAGACATGAAGGGAGATCGATTGCAAGGATTACAGAACCATATTTGCTTTCTAATGACCTACAACAAGCAAAGAGATCCACATCTATACCAAGGGCCACTGTTAACTACAAAGTTCAAATCCTCTTCAAGCAGCCAAATTTCCCTACAACAAAGGAGTTGCGAAGCGTCCATAACTTACAAAGGCAGGCCTCCACGTGTCAAGACCAAAAGCCAATGTCGTCATCATCTTCTTCTTCCAAGAGTAACAAAAAACACCCATTGTACCATGGAATTCGATGCCGTGGAGGGAAATGGGTGTCTGAAATCAGAGAGCCACGTAAGGATTCTCGCATTTGGCTCGGAACTTTCCCCACGCCGGAGATGGCCGCCGCCGCCTATGACGTGGCGGCGTTGGCCCTAAAAGGCGGCGACGCAGTCCTCAACTTCCCCAGCTGGGTCAATGCTTACCCGGTGCCGGCGTCCTCGTCGGCCTCCGACATTCAAAGCGCCGCCGCCGCCGCAGCCGCGCTCATGGCGCCTCAAGAACAGACACAAACCAATGAAGCGGCAGGTAATAATGCTGATCAATATGGGAATGAGGGGAATAATAATAATAACGTTTCGTGGTGTGAAGCAGATGATAATAATAGTAATAGTTACCAGTTTGTGGATGAGGAAGCTATATTTGGCATGCCGAATTTGCTGGTGGACATGGCCGGAGGAATGCTGCTTTCGCCGCCGAGAATCGACCCTCCTACCTCCGATAACTCTCCCGACGACCCGTCTTCGTATGGAGGATCGTTGTGGAACTATTTTTGA 963 0.4922 MERPLVAEMVRSAKIILGYLPFHPCGNSTCLSALRRNLENVCLGSIRTQALETGHRHEGRSIARITEPYLLSNDLQQAKRSTSIPRATVNYKVQILFKQPNFPTTKELRSVHNLQRQASTCQDQKPMSSSSSSSKSNKKHPLYHGIRCRGGKWVSEIREPRKDSRIWLGTFPTPEMAAAAYDVAALALKGGDAVLNFPSWVNAYPVPASSSASDIQSAAAAAAALMAPQEQTQTNEAAGNNADQYGNEGNNNNNVSWCEADDNNSNSYQFVDEEAIFGMPNLLVDMAGGMLLSPPRIDPPTSDNSPDDPSSYGGSLWNYF 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g1442 320 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 122 286 - -
Mibi12g1442 320 SMART rav1_2 142 204 IPR001471 GO:0003700|GO:0006355
Mibi12g1442 320 MobiDBLite consensus disorder prediction 117 142 - -
Mibi12g1442 320 MobiDBLite consensus disorder prediction 294 314 - -
Mibi12g1442 320 ProSiteProfiles AP2/ERF domain profile. 142 198 IPR001471 GO:0003700|GO:0006355
Mibi12g1442 320 CDD AP2 141 198 IPR001471 GO:0003700|GO:0006355
Mibi12g1442 320 Pfam AP2 domain 143 190 IPR001471 GO:0003700|GO:0006355
Mibi12g1442 320 Gene3D AP2/ERF domain 142 199 IPR036955 GO:0003700|GO:0006355
Mibi12g1442 320 MobiDBLite consensus disorder prediction 117 139 - -
Mibi12g1442 320 SUPERFAMILY DNA-binding domain 142 199 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g1442 Mibi-ChrMibi12 29996434 29999064 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g1442 139 319 AP2-EREBP Transcription Factor Family AT5G52020 51.366 5.92e-45 151
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mibi12g1442 AP2 3.7e-09 CL0081