Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g1430 ATGGGTAAGGTATCCAAATGGTTTCGTGGTCTACTCACTCTTAAAACTCCCGATTCCTCTTCTTCCTCTTCCAAATCACTCAAACACAAACGTCGTAGATGGAGCTTCGTCAAATCTTACGGAGAAAACCATAACCTCCCTTCCGCCGCCGCCACGGAGGCTACAGCTGGCATTCATAATAATGACAATCACACCATCGCCGTCACTGCAGCCTCCCCCCTCAGACACTGTAGCGTCCCACCCACCGCTAACCCTGAAGAATGTGCCGCCGTTAAGATTCAAGCCGCTTTTCGTGGCTGTCTGGCAAGGAGAGCCCTGCGAGCGCTAAAAGGATTGGTAAAGCTTCAGGCTTTGGTGAGAGGTCAGGTGGAGAGGAAGCGGACGGCGGAGATGCTGCAAAAAATGCGGTTACTCTTGAGATCTCAGGCTCAAGTTCGGGCTGGGCGGCTTAGGTCATCAAATGTCCACCTCCATGGTCCGGCAACACCTGACAAGGTAGAAAACCCAATCAGATCCAAGAGCATGAAATATGATCAACCATCAATGTTCAAGAGAGATAATTCCAAATCCTATGCCCAGATCAGTGGCAATAAGGAGAAATGTTGGAAGACAGCAGACAGTTGGGTGGATGAGAAATCATGGAATCGACTAAGATCGTCCGTAAGAGCCTGTGTGGACTATGAAAGAAATGCAAGGATCCTGGAAATGGATTCCGAGAAAGGAATTTTTGCACCAAAACGCAGAGCCAGAAACCTCTTCCACACCACTAATCTTGCTTTAATTTCTGATCCTTATAGTCAAACTCTGACTCCCACAAAGAGCTTAGCAATTCATCATTCCGGTCCAATCCATCGTAAAGCTCATCAATCTTACAGCCCACCTGAAGGGCATGACGTTGATGAGACCCCCTTCTGCACAGCAAACAATAGTCCTCTGTTTTTTTCTGGGTCCTCTAGGGAGAGCAGCTCTAAAAGAAGCCCTTTTACTCCTACCAAGAGTGATGGTTCAAGAAGCTTTGTAAGTGCTTATTCTGACTGCCCAAATTATATGGCTTATACAGAATCTTCCAAGGCAAAGGTCAGATCTCTCAGTGCTCCAAAACAGAGGACAAGATATGAGAGGTCTGGTTCGTCTAAATTGGCCGCACAGAGGGCATCTGCTATGCATGCAAGCTTCACTAACAACGCCAATCCAGCTTCTGATCGTTTGGTTAGTTTGACTATGGGTTATAGATAG 1236 0.4717 MGKVSKWFRGLLTLKTPDSSSSSSKSLKHKRRRWSFVKSYGENHNLPSAAATEATAGIHNNDNHTIAVTAASPLRHCSVPPTANPEECAAVKIQAAFRGCLARRALRALKGLVKLQALVRGQVERKRTAEMLQKMRLLLRSQAQVRAGRLRSSNVHLHGPATPDKVENPIRSKSMKYDQPSMFKRDNSKSYAQISGNKEKCWKTADSWVDEKSWNRLRSSVRACVDYERNARILEMDSEKGIFAPKRRARNLFHTTNLALISDPYSQTLTPTKSLAIHHSGPIHRKAHQSYSPPEGHDVDETPFCTANNSPLFFSGSSRESSSKRSPFTPTKSDGSRSFVSAYSDCPNYMAYTESSKAKVRSLSAPKQRTRYERSGSSKLAAQRASAMHASFTNNANPASDRLVSLTMGYR 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g1430 411 SMART iq_5 108 129 IPR000048 GO:0005515
Mibi12g1430 411 SMART iq_5 85 107 IPR000048 GO:0005515
Mibi12g1430 411 Pfam IQ calmodulin-binding motif 88 107 IPR000048 GO:0005515
Mibi12g1430 411 MobiDBLite consensus disorder prediction 315 337 - -
Mibi12g1430 411 PANTHER IQ-DOMAIN 5-RELATED 1 379 - -
Mibi12g1430 411 Gene3D - 86 136 - -
Mibi12g1430 411 ProSiteProfiles IQ motif profile. 86 114 IPR000048 GO:0005515
Mibi12g1430 411 Pfam Protein of unknown function (DUF4005) 318 392 IPR025064 -
Mibi12g1430 411 ProSiteProfiles IQ motif profile. 110 136 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g1430 Mibi-ChrMibi12 29865790 29868813 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g1430 87 411 IQD Protein Family AT4G23060 38.227 3.16e-49 172