Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mibi12g1408 | ATGGCGTCCAAGCTCTTGGCACTGAGTTGCATGGGCAGTGAAGGACGTGTCCGGCCATGGACACGGCCTCATTATCCGTCGATGCCGACGTACCCGAAGGCGGAGGAGGGAAGCAGCACCACCGTGGAGGGGTCAGAAGTGAAGGCCCTTTTCTCAGTCATCGGAATGACATGTTCTGCTTGCGCCGCCTCCGTCGAGAAAGGGATCAAACGCCTCCCCGGAATCCGGGAGGCCGTCGTCGATGTCCTCAATAATCGAGCTTTGGTTCTCTTCTACCCCTCCTTTGTTAACTGCACATATCACATGCACCCACCCATTACACCCAATAATTTCTCAAATTTTGGCTATAAAGTTAATGGCGACTTGCAAACCCATTTTCGCACCAAAAAATTTTTCAAAAAAAAAAAAAAGGAGTTTCTGGGGTTACATCGAAAAGGTTCCATGGCGTCAAAGCTCCTAGCTTTGGCCTGCATTCGGAGCAATGGATGGGACAGGCTTTTGACACGGCCTCATTACCCGTCGATGCCGACCTACCCAAAGGGCGTGGCGGCGAAAGGTTCAGAAGCCAAAGCCCTTTTCTCCGTCCTCGGAATGTCTTGCTCTGCTTGCGCAGGTTCCGTCGAGAAAGCCATTAAACGCCTACCTGGGATTCGTGAGGCAATCGTCGATGTTCTTAATAATCGAGCTTTCGTTATCTTCTACCCTTCCTTCGTTAACGAGGAGACTATTCGTGAGGCCATTGAAGACACTGGATTTGAAGCTACATTGCTAAGAGATGAGATGAATGATAGATCAGTTCAAGTATGTCGCATAACCGTAACTGGAATGACTTGCACTTCTTGCTCCTCCACTGTGGAATCAGCTTTGCAAGCAATTCCGGGTGTTCTGAAAGCTCAAGTGGCTTTGGCGACTTATGAAGCGGAAGTACATTACAATCCAAACATTGTCAACTACAATCAAATTCTGGAAGCCATAGAAGACACTGGATTTGAAGCCACACTTATCAGTTCAGGTGAAGACATAAGCAAAGTAGAGCTCCAAGTTGATGGTGTACGAACTGAACATTCCATGAGAATCGTTGAAACTTCTCTTCAAGCTCTCCCTGGGGTCCAGGATATAGAATTATATCCTGACCTGAAGAAAATATCAGTTTCATTCAAACCTGACGTAACAGGACCTAGGAATTTCATCAATGTTACTGAAAAAATTGGGTCCGGACGTTTCAAGGCTAAATTATTCTCTCAGCAAGGAGAACGAAGAGATACTCATGGACGGAAGGAAATTAAACAATATTATAGATCCTTCTTATGGAGTTTGGTTTTTACTATTCCAGTCTTTTTAACCTCTATGATTCTTATGTATATCCCTGGAATTAAGCATGGACTAGATACCAAAGTTGTCAATATGCTTACAGTGGGACAGCTTTTAAGATGGGTGCTTTCCACGCCAGTACAGTTCATAATTGGCCGGAGATTTTACATTGGATCTTACAAATCCTTACGCCATGGTTCTGCCAACATGGACGTCTTGATTGCCTTAGGAACAAATGCAGCATACTTCTACTCAGTTTACTCGGTACTGAGAGCTGCCAGCTCCCCACATTTCGAGGGGACTGATTTCTTTGAGACCAGCGCAATGCTTATTTCATTCATTCTGCTGGGAAAGTATCTGGAAGTCCTCGCCAAGGGGAAGACATCTAATGCTATCGCCAAGCTCATGAACTTGACCCCTGACACAGCTATATTGTTGACCCTGGATGATGAAGGGAATGTTGCTGATGAAGAAGAGATTGACAGTCGTTTGATTCAAAAGAATGATCTGATTAAAATTATCCCTGGTGCAAAAGTAGCTTCTGATGGATATGTCGTCTGGGGCCAGAGCCACGTGAATGAGAGCATGATAACCGGGGAGGCACGTCCTGTCGCGAAGAGGAAGGGCGATCCTGTTATTGGGGGAACTGTGAATGAGAATGGAGTGTTACATGTCAGGGCAACAAGAGTTGGATCAGAGAGTGCTCTTTCACAGATTGTTCGATTAGTTGAGTCAGCACAGTTGGCCAAAGCTCCTGTGCAGAAGTTTGCTGATCGCATTTCGAAATTCTTTGTGCCTTTGGTCATTTTAATCTCTGTCACCACATTTCTTGCATGGTTCTTAGCTGGAAGGATCAATGCGTACCCGAAATCTTGGATACCATCTTCCATGGATAGTTTTGAGCTTGCATTACAGTTTGGCATCTCTGTCATGGTCATAGCTTGCCCTTGTGCTCTAGGTCTAGCCACACCAACTGCTGTTATGGTTGGCACAGGAGTTGGTGCATCTCAAGGTGTACTAATCAAAGGAGGGCAAGCATTAGAAAGTACACATAAGGTGCAATGCATTGTCTTTGATAAGACTGGTACTCTCACTGTTGGGAAGCCTGTGGTTGTAAACACCAGATTATTGATTAATATGGTACTCCAGGAGTTCTATGAACTTGTAGCAGGAGCCGAGGTGAACAGCGAGCATCCATTGGCCAAGGCCATTGTTGAGTATGCCAAGAAATTTAAAGATGAAGAGAATCCTGCTTGGCCTGAAACACGAGATTTTGTCTCCATACCTGGCCATGGGGTGAAGGCCATTGTTCGAAACAAGGAAATAATTGTGGGTAACAAGAGCTTGTTGGCTGACCATAATATTGCAGTTCCTGTGGAGGCAGAAGATATGCTGGCTGAGGCTGAGGAAATGGCTCAAACTGGAATTTTGGTATCGATTAATGGGGAAGTGGCTGGAGTTGTAGCAGTATCTGATCCATTGAAACCGGGTGCTCAAGAAGTGATCTCAATTCTCAAGTCCATGAACATCAAAAGCATTGTAGTAACCGGTGACAATAGGGGAACTGCTAATTCTATAGCAAGGGAAGTTGGGATTGATGAAGTCTTTGCTGAGACTAAACCAGAGCAGAAAGCAGAGAAAGTGAAGGAGTTGCAGGCTGCTGGATATACAGTGGCAATGGTTGGGGATGGTATCAATGATTCACCAGCACTGGTAGCAGCAAATGTGGGAATGGCAATTGGTGCTGGCACAGACATAGCTATTGAGGCTGCTGACATTGTTCTGATGAAGAGCAACTTGGAGGATGTGATTACTGCCATTGATCTTTCCAGAAGAACATTTTTCCACATTCGTCTCAATTACATTTGGGCTTTAGGTTATAACCTTCTAGGCATTCCAATCGCTGCTGGAGTTCTTTTCCCTTTCACAGGATTCCGATTGCCTCCTTGGATTGCTGGGGCTGCTATGGCAGCCTCATCTGTTAGTGTTGTTTGTTGTTCTCTATTGTTGAAATATTATAGGAGGCCTAAGAAACTGGACAAGCTTGAGATTCGAGGCATTAGCATTGAATGA | 3384 | 0.4521 | MASKLLALSCMGSEGRVRPWTRPHYPSMPTYPKAEEGSSTTVEGSEVKALFSVIGMTCSACAASVEKGIKRLPGIREAVVDVLNNRALVLFYPSFVNCTYHMHPPITPNNFSNFGYKVNGDLQTHFRTKKFFKKKKKEFLGLHRKGSMASKLLALACIRSNGWDRLLTRPHYPSMPTYPKGVAAKGSEAKALFSVLGMSCSACAGSVEKAIKRLPGIREAIVDVLNNRAFVIFYPSFVNEETIREAIEDTGFEATLLRDEMNDRSVQVCRITVTGMTCTSCSSTVESALQAIPGVLKAQVALATYEAEVHYNPNIVNYNQILEAIEDTGFEATLISSGEDISKVELQVDGVRTEHSMRIVETSLQALPGVQDIELYPDLKKISVSFKPDVTGPRNFINVTEKIGSGRFKAKLFSQQGERRDTHGRKEIKQYYRSFLWSLVFTIPVFLTSMILMYIPGIKHGLDTKVVNMLTVGQLLRWVLSTPVQFIIGRRFYIGSYKSLRHGSANMDVLIALGTNAAYFYSVYSVLRAASSPHFEGTDFFETSAMLISFILLGKYLEVLAKGKTSNAIAKLMNLTPDTAILLTLDDEGNVADEEEIDSRLIQKNDLIKIIPGAKVASDGYVVWGQSHVNESMITGEARPVAKRKGDPVIGGTVNENGVLHVRATRVGSESALSQIVRLVESAQLAKAPVQKFADRISKFFVPLVILISVTTFLAWFLAGRINAYPKSWIPSSMDSFELALQFGISVMVIACPCALGLATPTAVMVGTGVGASQGVLIKGGQALESTHKVQCIVFDKTGTLTVGKPVVVNTRLLINMVLQEFYELVAGAEVNSEHPLAKAIVEYAKKFKDEENPAWPETRDFVSIPGHGVKAIVRNKEIIVGNKSLLADHNIAVPVEAEDMLAEAEEMAQTGILVSINGEVAGVVAVSDPLKPGAQEVISILKSMNIKSIVVTGDNRGTANSIAREVGIDEVFAETKPEQKAEKVKELQAAGYTVAMVGDGINDSPALVAANVGMAIGAGTDIAIEAADIVLMKSNLEDVITAIDLSRRTFFHIRLNYIWALGYNLLGIPIAAGVLFPFTGFRLPPWIAGAAMAASSVSVVCCSLLLKYYRRPKKLDKLEIRGISIE | 1127 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mibi12g1408 | 1127 | ProSitePatterns | Heavy-metal-associated domain. | 195 | 224 | IPR017969 | GO:0046872 | |
Mibi12g1408 | 1127 | CDD | HMA | 193 | 255 | IPR006121 | GO:0046872 | |
Mibi12g1408 | 1127 | FunFam | Copper-transporting ATPase HMA5 | 266 | 337 | - | - | |
Mibi12g1408 | 1127 | Gene3D | - | 342 | 404 | - | - | |
Mibi12g1408 | 1127 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 547 | 1076 | IPR001757 | GO:0005215|GO:0005524|GO:0016020|GO:0016887 | |
Mibi12g1408 | 1127 | ProSitePatterns | Heavy-metal-associated domain. | 273 | 302 | IPR017969 | GO:0046872 | |
Mibi12g1408 | 1127 | SUPERFAMILY | HMA, heavy metal-associated domain | 187 | 258 | IPR036163 | GO:0046872 | |
Mibi12g1408 | 1127 | ProSiteProfiles | Heavy-metal-associated domain profile. | 48 | 120 | IPR006121 | GO:0046872 | |
Mibi12g1408 | 1127 | SUPERFAMILY | HAD-like | 793 | 1104 | IPR036412 | - | |
Mibi12g1408 | 1127 | Gene3D | - | 761 | 1055 | IPR023214 | - | |
Mibi12g1408 | 1127 | CDD | HMA | 51 | 94 | IPR006121 | GO:0046872 | |
Mibi12g1408 | 1127 | SFLD | p-type atpase | 776 | 1050 | IPR044492 | - | |
Mibi12g1408 | 1127 | CDD | HMA | 271 | 333 | IPR006121 | GO:0046872 | |
Mibi12g1408 | 1127 | TIGRFAM | TIGR00003: copper ion binding protein | 271 | 332 | IPR006122 | GO:0005507 | |
Mibi12g1408 | 1127 | TIGRFAM | TIGR00003: copper ion binding protein | 192 | 254 | IPR006122 | GO:0005507 | |
Mibi12g1408 | 1127 | Pfam | E1-E2 ATPase | 593 | 772 | - | - | |
Mibi12g1408 | 1127 | Coils | Coil | 1116 | 1127 | - | - | |
Mibi12g1408 | 1127 | FunFam | Copper-transporting ATPase 1, putative | 562 | 684 | - | - | |
Mibi12g1408 | 1127 | TIGRFAM | ATPase-IB_hvy: heavy metal translocating P-type ATPase | 507 | 1107 | IPR027256 | GO:0006812|GO:0016020|GO:0019829 | |
Mibi12g1408 | 1127 | Gene3D | - | 267 | 339 | - | - | |
Mibi12g1408 | 1127 | SFLD | C1.7: P-type atpase like | 776 | 1050 | - | - | |
Mibi12g1408 | 1127 | ProSiteProfiles | Heavy-metal-associated domain profile. | 343 | 404 | IPR006121 | GO:0046872 | |
Mibi12g1408 | 1127 | ProSiteProfiles | Heavy-metal-associated domain profile. | 268 | 334 | IPR006121 | GO:0046872 | |
Mibi12g1408 | 1127 | PANTHER | P-TYPE CATION-TRANSPORTING ATPASE | 1 | 97 | - | - | |
Mibi12g1408 | 1127 | Gene3D | - | 879 | 929 | IPR023299 | GO:0000166 | |
Mibi12g1408 | 1127 | Gene3D | - | 801 | 878 | IPR023299 | GO:0000166 | |
Mibi12g1408 | 1127 | FunFam | Copper-transporting ATPase HMA5 | 188 | 259 | - | - | |
Mibi12g1408 | 1127 | PRINTS | P-type cation-transporting ATPase superfamily signature | 945 | 955 | - | - | |
Mibi12g1408 | 1127 | PRINTS | P-type cation-transporting ATPase superfamily signature | 923 | 934 | - | - | |
Mibi12g1408 | 1127 | PRINTS | P-type cation-transporting ATPase superfamily signature | 794 | 808 | - | - | |
Mibi12g1408 | 1127 | PRINTS | P-type cation-transporting ATPase superfamily signature | 630 | 644 | - | - | |
Mibi12g1408 | 1127 | PRINTS | P-type cation-transporting ATPase superfamily signature | 1021 | 1033 | - | - | |
Mibi12g1408 | 1127 | PRINTS | P-type cation-transporting ATPase superfamily signature | 998 | 1017 | - | - | |
Mibi12g1408 | 1127 | SUPERFAMILY | HMA, heavy metal-associated domain | 264 | 338 | IPR036163 | GO:0046872 | |
Mibi12g1408 | 1127 | SUPERFAMILY | Calcium ATPase, transduction domain A | 594 | 680 | IPR008250 | - | |
Mibi12g1408 | 1127 | SUPERFAMILY | HMA, heavy metal-associated domain | 44 | 97 | IPR036163 | GO:0046872 | |
Mibi12g1408 | 1127 | Pfam | Heavy-metal-associated domain | 51 | 89 | IPR006121 | GO:0046872 | |
Mibi12g1408 | 1127 | Pfam | Heavy-metal-associated domain | 271 | 331 | IPR006121 | GO:0046872 | |
Mibi12g1408 | 1127 | Pfam | Heavy-metal-associated domain | 193 | 253 | IPR006121 | GO:0046872 | |
Mibi12g1408 | 1127 | SUPERFAMILY | HMA, heavy metal-associated domain | 338 | 405 | IPR036163 | GO:0046872 | |
Mibi12g1408 | 1127 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 539 | 786 | IPR023298 | - | |
Mibi12g1408 | 1127 | Gene3D | - | 43 | 118 | - | - | |
Mibi12g1408 | 1127 | Gene3D | - | 184 | 256 | - | - | |
Mibi12g1408 | 1127 | PRINTS | Copper-transporting ATPase 1 signature | 59 | 77 | - | - | |
Mibi12g1408 | 1127 | PRINTS | Copper-transporting ATPase 1 signature | 435 | 456 | - | - | |
Mibi12g1408 | 1127 | PRINTS | Copper-transporting ATPase 1 signature | 294 | 317 | - | - | |
Mibi12g1408 | 1127 | PRINTS | Copper-transporting ATPase 1 signature | 323 | 343 | - | - | |
Mibi12g1408 | 1127 | PRINTS | Copper-transporting ATPase 1 signature | 490 | 515 | - | - | |
Mibi12g1408 | 1127 | PRINTS | Copper-transporting ATPase 1 signature | 268 | 293 | - | - | |
Mibi12g1408 | 1127 | PRINTS | Copper-transporting ATPase 1 signature | 470 | 490 | - | - | |
Mibi12g1408 | 1127 | CDD | P-type_ATPase_Cu-like | 433 | 1108 | - | - | |
Mibi12g1408 | 1127 | FunFam | Probable copper-transporting ATPase HMA5 | 896 | 1055 | - | - | |
Mibi12g1408 | 1127 | Gene3D | - | 562 | 684 | - | - | |
Mibi12g1408 | 1127 | ProSitePatterns | Heavy-metal-associated domain. | 53 | 82 | IPR017969 | GO:0046872 | |
Mibi12g1408 | 1127 | ProSiteProfiles | Heavy-metal-associated domain profile. | 190 | 256 | IPR006121 | GO:0046872 | |
Mibi12g1408 | 1127 | Pfam | haloacid dehalogenase-like hydrolase | 791 | 1012 | - | - | |
Mibi12g1408 | 1127 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 796 | 802 | IPR018303 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mibi12g1408 | Mibi-ChrMibi12 | 29714015 | 29721945 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mibi12g1408 | 1 | 97 | Primary Pumps ATPases | AT1G63440 | 46.535 | 1.35e-18 | 90.1 |