Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g1406 ATGCCTTTATTTCTGTTTATCTTCTCATATGAATCCCAGAATACTTGCCAATGTATTGGTCACAAATCTCTTAGTAAATGCATGGATGCTAGAGAAGCTATGGCATTCTCTGGAGGCAGCCACCCTTCATATTACATGCATAGAGGAGGAGGCATTGTTGGGTCTGTCTCTGGAACACATTCCGGAGGGTTTCAAGTGCCTCCTGGGTTCAGACCAGACACAGGTATTCCATCACAGTCAAATGTACGAGGTAGCCCTATGTCTATGTCTATGGGTTCTACAGTTACAGTAGAACCTGTTCGTACTGATTATAGTCATGCTCATGGTCATGGCATTAGCATTAGTTCTACTCCTGGAGTGCCTTCTTCAAGTGAGCGTGTGAAAAAGAAACGAGGAAGGCCTCGTAAGTATCGTCCTGATGCACCTGTTTCTCTGGGTCTGTCTCCCATGTCTGCCACTGCAAATTCTACTCCTGCTTCGAGTACTCCATCCCAGAAACGAGCTAGAGGGCGCCCGCCTGGAAGTGGAAGAAAACAACAACTAGCCTCGCTAGGTGAATGGATGAACAGTTCTGCAGGGACGGCTTTTGCACCTCATGTTATCACGATTGGAGCTGGGGAGGACATTGTAGCAAAGTTATTGACCATTTCACAGCAGAGATCTAGGGCGCTGTGCATCTTGTCAGGTACTGGGACAGTTTGTTCAGTTACCCTGCGGCAGCCTGCTTCTAATGCTGTCAGTATCACTCTTGAGGGCCGATTCCAAATATTATGCTTGTCTGGTTCTTACCTGGTTGCCGAAGATGGTGGACCCCGTAATAGAACAGGTGGCTTGAGTGTTTCCCTTTCTAGTCCTGATGGTCATGTTATTGGTGGTGGAGTTGCTGTGCTTGTTGCTGCAAGTCAAGTCCAGGTGGTAGTGTGCAGTTTTATGTATGAAGGGTCCAAGACCAAGACTAAGCAAGTGAGTGCCCCTGAGGGCAGTGTTTCTGAAGCTGAGCATGATAACAAGTTAGCTACTCTGGCGAGTGCTCCGCCGTCCCAAAGCTATGGTCAACCAACAAGAGGCATTTGGCCCTCCGATCTAAAAAGTACACACACTGGTATTGACTTGATGCATGGGTAA 1125 0.4764 MPLFLFIFSYESQNTCQCIGHKSLSKCMDAREAMAFSGGSHPSYYMHRGGGIVGSVSGTHSGGFQVPPGFRPDTGIPSQSNVRGSPMSMSMGSTVTVEPVRTDYSHAHGHGISISSTPGVPSSSERVKKKRGRPRKYRPDAPVSLGLSPMSATANSTPASSTPSQKRARGRPPGSGRKQQLASLGEWMNSSAGTAFAPHVITIGAGEDIVAKLLTISQQRSRALCILSGTGTVCSVTLRQPASNAVSITLEGRFQILCLSGSYLVAEDGGPRNRTGGLSVSLSSPDGHVIGGGVAVLVAASQVQVVVCSFMYEGSKTKTKQVSAPEGSVSEAEHDNKLATLASAPPSQSYGQPTRGIWPSDLKSTHTGIDLMHG 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g1406 374 Gene3D - 198 333 - -
Mibi12g1406 374 MobiDBLite consensus disorder prediction 342 361 - -
Mibi12g1406 374 MobiDBLite consensus disorder prediction 109 123 - -
Mibi12g1406 374 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 99 338 IPR039605 GO:0003680
Mibi12g1406 374 CDD DUF296 198 295 IPR005175 -
Mibi12g1406 374 MobiDBLite consensus disorder prediction 106 181 - -
Mibi12g1406 374 ProSiteProfiles PPC domain profile profile. 193 335 IPR005175 -
Mibi12g1406 374 MobiDBLite consensus disorder prediction 69 92 - -
Mibi12g1406 374 SUPERFAMILY AF0104/ALDC/Ptd012-like 195 312 - -
Mibi12g1406 374 Pfam Plants and Prokaryotes Conserved (PCC) domain 198 310 IPR005175 -
Mibi12g1406 374 MobiDBLite consensus disorder prediction 74 92 - -
Mibi12g1406 374 MobiDBLite consensus disorder prediction 342 374 - -
Mibi12g1406 374 MobiDBLite consensus disorder prediction 148 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g1406 Mibi-ChrMibi12 29701422 29705618 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g1406 28 312 AT-hook Motif Nuclear Localized (AHL) Family AT1G63470 54.636 5.25e-90 274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi12g1406 12 29701422 29705618 Mibi12g1406 12 29701422 29705618 ECH