Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g1395 ATGGTAAATTGTGGCTTCTTGATTGGAAAAGAAAAAAACCAGGAAATGGTACCAGAGAACCTGAAGAAACAACTAGCCCTAGCTGTGAGAAGCATCCAATGGAGCTACGCAATTTACTGGTGTGGTTCACCAGACAACCTCGGGGTGTATGAGTGGGGTGAAGGGTACTATAATGGGGACATAAAGACGAGGAAAACAAGCCAAGCAGGAGAATTTAATTCTGACCAAATAGGTTTAAGAAGGAGTGAGCAGCTCAGAGATCTATATGACTCTCTTGCAACTGCAGAATCCAGTCCACAAGCTAAAAGGCCTTCAGCTTCATTATCCCCTGAGGATCTTACTGATACAGAATGGTATTATTTGGTGTGCATGTCATTTGTATTCAACTTTGGCGAAGGGTTGCCTGGAAGAACTCTGGCGAAAGGCCATCCCATTTGGCTGTACAATGCCCATTTGGCAGATAGTAGAATTTTTAGTCGCTCTCTTCTGGCGAAGAGTGCATCCATTCAGACAGTGGTATGCTTTCCTTTTCTGGATGGTGTTCTTGAGCTAGGTACAACCGATCTGGTCTCAGAGGACCTCAGTCTCATTCAACGCATGAAGACTTCTTACTTGGATAATTTAGATGACAAAGTTCGCAAGAACTCTGTAGTTGCATTCAATACAGGGGACAGGGAAGAAATCGCTTGTGCTGTATTTGACCATAATGTTTTTGATGCAAAATTGACTCCTGAACAAGAATATGAATTAGCCAATGCAATTTCTCCCAATAATAGTTCAAATGAGTTTCAAGCCAATAACAAACAAGCAGATGAGAGATTCGTGGTTGAAAGAATAACTGGTGTTGCTTCTCATGTCCAAAGCTGGCAGGTGATGGAGGATGAGTTGAGTAATTGTGCTCATACTTCCATGAATACTAGTGACTGTATATCTCAAAGTTTTGCTGGTTCTGAAAAGAATGCTTCTGTTCCCAAGGGTGATCATTGTGGGCAAGATCTTCAAGAGGGGAAAAACACAAAAATGACCATGGTAGATGCTCATTCTGATGATTGGCATTATCAAAAAGTTCTTTCTTCTCTTCTTAAAAGCTCAGACCAATTAATTATGGGAGCACATTTTCAAAACACTCAATGTGAATCCAGCTTTGTCGGTTGGAAGAAAGAAGGATCAATAGGTTGTCAACGGCTAAGAGGGGGAGCCCAACAAAAAATATTGAAGAAGATATTGTTTGAAGTTCCTTGTATGCACACGGATTTATTGCTTGAGGCTCAGGAAGAAAATGACTATAAAGAGGGAATGAGACCTGAGGCCGATGAAATTGGCTTGAACCATGTACTGTCTGAAAGAAAGAGAAGGGCAAAACTAAATGAAAGGTTTTTAACCCTTAAATCATTAGTTCCTTTGATTACTAGGGACGACAAAGTTTCAATACTAGATGAGGCGATAGAATACCTTAAAAAGCTGGAGAAAAAGGTGAGGGAGTTGGAAGCTCGCCGGGAGTCCAAAGATTCAGAGACTAGAACAAAAAGGGCACCTCGAGATGTGGTGGAAAGGACCTGTGATAATTATTGTAACAACAGATTTGATAATGGCAAGTCAGCCACGAACAAAAGGAAGGCTTGTGACATTGATGAGACAGAGACAGAGATTGATTCAGTTCGTCTAAAAGACATTTCTAATAACGTTACTATTTGCATGAATGACAACGAGGTTTTGATTGAATTGAAGTGTCCATGGAGAGAAGGAGTTCTACTAGAAATAATGGAAGCAATCAGCAATCTTCATTTAGATTTTCATTCAGTTCATTCATCAGAAGCTGATGGGACTTTCTATCTAACCATGAAATCCAAGATCAGAGGAGCAGCTTTTAACTCAACAAAAAAGATTAAACAAGCACTCCTCAAGGCAGCTTGGAAGTGTTGA 1923 0.4051 MVNCGFLIGKEKNQEMVPENLKKQLALAVRSIQWSYAIYWCGSPDNLGVYEWGEGYYNGDIKTRKTSQAGEFNSDQIGLRRSEQLRDLYDSLATAESSPQAKRPSASLSPEDLTDTEWYYLVCMSFVFNFGEGLPGRTLAKGHPIWLYNAHLADSRIFSRSLLAKSASIQTVVCFPFLDGVLELGTTDLVSEDLSLIQRMKTSYLDNLDDKVRKNSVVAFNTGDREEIACAVFDHNVFDAKLTPEQEYELANAISPNNSSNEFQANNKQADERFVVERITGVASHVQSWQVMEDELSNCAHTSMNTSDCISQSFAGSEKNASVPKGDHCGQDLQEGKNTKMTMVDAHSDDWHYQKVLSSLLKSSDQLIMGAHFQNTQCESSFVGWKKEGSIGCQRLRGGAQQKILKKILFEVPCMHTDLLLEAQEENDYKEGMRPEADEIGLNHVLSERKRRAKLNERFLTLKSLVPLITRDDKVSILDEAIEYLKKLEKKVRELEARRESKDSETRTKRAPRDVVERTCDNYCNNRFDNGKSATNKRKACDIDETETEIDSVRLKDISNNVTICMNDNEVLIELKCPWREGVLLEIMEAISNLHLDFHSVHSSEADGTFYLTMKSKIRGAAFNSTKKIKQALLKAAWKC 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g1395 640 Coils Coil 478 505 - -
Mibi12g1395 640 Pfam Helix-loop-helix DNA-binding domain 443 489 IPR011598 GO:0046983
Mibi12g1395 640 Gene3D - 442 530 IPR036638 GO:0046983
Mibi12g1395 640 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 442 501 IPR036638 GO:0046983
Mibi12g1395 640 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 21 203 IPR025610 -
Mibi12g1395 640 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 439 488 IPR011598 GO:0046983
Mibi12g1395 640 SMART finulus 445 494 IPR011598 GO:0046983
Mibi12g1395 640 PANTHER TRANSCRIPTION FACTOR TT8 12 635 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g1395 Mibi-ChrMibi12 29592114 29595251 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g1395 12 640 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G41315 48.030 0.0 553
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mibi12g1395 bHLH-MYC_N 3.3e-47 CL0161