Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g1380 ATGGCACGATGGTCAGGTTTCACTAACGGATCTTCCGAAGATTGCCTTGAAACTTTTGGAGGACATCAGGGTAATGACTGTTGCCTCAACGTTGCTCACGTTGTTACAGATCAACTTGATGATGATGAAGTTAAACTAGAGTGCTTGTTTCATCAGCTTCTATCTATTTGTATAGAGGAGAAGAATTCTAGAGGCATTATTCGTCCTCTTCCTGTAATGCTAGATGATGGTCAATCGTTGGATTTATACAAACTGTTCTTTTTTGTGAAGGAAAGAGGTGGGTATGCTTTGGTGTCTGAGAAAGGATTGTGGGGTTTTGTAACTGAGGAATTGGGTTTGAACCCTAAACTTTTGGCTTCGGTGAAATTGGTATATGATAAATATTTGAATGAGTTTGAAAGATGGCTTGGCAAAACTTGTGGAGGGATGAATTTAAAAAGTGGGAATCATGGGTGTAATATGGATTTTAAGCCAGTGCCTCCGGAGCTTGTAAAAGAGTTTAGAGATTTATTGTGCGGCGACATTGAGTTGGAGGATGATGTATCTGTTCAGCTGCTATCATGTGAAATGAGAAGCAACATTGATTTGATTAATCACAAGAGTGAAATGAATTTGTTGGATAACGAAAATCAACCTCCTATAAGCGAGGATGTCCACAGTATCCTTGGTGATGCTAATTCGAAATTTTGTAATAGTGTTGAGAATGATCTTGTTAGCTTGAACTCAGAAGTTCCTGAGAAGGAATTTAGTTCTCGCAAGCGCAAACGAGATGCATTGTCTTCAATGTTGAACTGGATCAGAAAAACGGCGAAAAATCCTCTTGATCCTTCAATTGAACTGATACCAGAAGCATCCAAGTGGAAGGAGTATAAAGGACAAGACTTTTGGGTTCAGATAATTAGAGCAAGAGAGGCACTTCAGCTGAAGTCTTGCGACAAACCGAACTGTGGGCAGTCTTCCTTGCAGAAGCAAAAGATGCATCCTGCCATGTATGAGGATCATGCTGCTGTCAGTCACCATTCTGCGGCAAAACTGAGATGGAGCAGAAGGCTTCCCACCTCAGCTAAACCTCATATATGCTCTTGTTGTGATTCACATTCAGCTATTGAAAACAAGTTACCATGTTCAGTCACCACTGAGACAGAAAATGCTTCACTAGAGAAGACAAATGCAGCAGATGATTCCTTGAATGCAAAGGAAACAGCTAAGCCGTCCACTGATGATACAGTTAAAAAGGTAGTAGCTATAGGTCCTCTTTTTCAAGCTGAAGTGCCAAAATGGACTGGTGTGGTTTCTGAAAGTGATTCTAAATGGTTGGGCACGCAAATATGGCCTTTGAACGATAGGGAACCACAACCTGTCACTGAGACCGGTATTATTGGGAGAGGTAGACAAGAGAATTGTGGCTGTCGTGTTCAAGGTTCTGTTGAATGTGTTAGATTTCATATTGCTGAGAAGAGGATGAAGTTGAAGCTTGACTTGGGTTTGGCATTTTACCATTGGGGATTTGATTGTATGGGGGAGGAAGTTTCACTTCAATGGACTGCTGAAGAAGAAAAGAAATTCAAAGAAATTGTGATGTCAAATCTGCCCTCCCAAATTAAGAGCAGAATCTTCAAGTATTTTCCAAAGAAGACAAGGAAAAGCTTGACGAGCTATTACTTCAATGTATTTCTTATTCAACGCAGGATTTATCAGAATCGTGTGACTCCAAATAATGTTGATAGTGATGATGACGAACATGAATTCGGATCTTTTACCGACGGCTTTGGGATGGAAGCTGTAAAGGGTCCAGGTTACAAGTTTCTGGAGTGTTCACTGAACAATCGATGCACTGAATTGGAGTGA 1848 0.4069 MARWSGFTNGSSEDCLETFGGHQGNDCCLNVAHVVTDQLDDDEVKLECLFHQLLSICIEEKNSRGIIRPLPVMLDDGQSLDLYKLFFFVKERGGYALVSEKGLWGFVTEELGLNPKLLASVKLVYDKYLNEFERWLGKTCGGMNLKSGNHGCNMDFKPVPPELVKEFRDLLCGDIELEDDVSVQLLSCEMRSNIDLINHKSEMNLLDNENQPPISEDVHSILGDANSKFCNSVENDLVSLNSEVPEKEFSSRKRKRDALSSMLNWIRKTAKNPLDPSIELIPEASKWKEYKGQDFWVQIIRAREALQLKSCDKPNCGQSSLQKQKMHPAMYEDHAAVSHHSAAKLRWSRRLPTSAKPHICSCCDSHSAIENKLPCSVTTETENASLEKTNAADDSLNAKETAKPSTDDTVKKVVAIGPLFQAEVPKWTGVVSESDSKWLGTQIWPLNDREPQPVTETGIIGRGRQENCGCRVQGSVECVRFHIAEKRMKLKLDLGLAFYHWGFDCMGEEVSLQWTAEEEKKFKEIVMSNLPSQIKSRIFKYFPKKTRKSLTSYYFNVFLIQRRIYQNRVTPNNVDSDDDEHEFGSFTDGFGMEAVKGPGYKFLECSLNNRCTELE 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g1380 615 MobiDBLite consensus disorder prediction 381 404 - -
Mibi12g1380 615 SUPERFAMILY ARID-like 46 136 IPR036431 GO:0003677
Mibi12g1380 615 SMART ARID_2 41 133 - -
Mibi12g1380 615 Pfam ARID/BRIGHT DNA binding domain 63 133 IPR001606 GO:0003677
Mibi12g1380 615 SMART bright_3 45 138 IPR001606 GO:0003677
Mibi12g1380 615 MobiDBLite consensus disorder prediction 381 396 - -
Mibi12g1380 615 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 2 38 593 - -
Mibi12g1380 615 Gene3D - 37 141 IPR036431 GO:0003677
Mibi12g1380 615 SMART ELM2_2 414 465 IPR000949 -
Mibi12g1380 615 CDD ARID 63 133 - -
Mibi12g1380 615 ProSiteProfiles ARID domain profile. 44 137 IPR001606 GO:0003677
Mibi12g1380 615 CDD SANT 514 558 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g1380 Mibi-ChrMibi12 29482392 29486469 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR ARID Mibi12g1380 ARID 2e-10 CL0123