Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g1379 ATGGGCGGTTGTTGTTGCTGTTGCTGTTCTTCCAAAGAAACTGAATTGAGCGATCCACCAGCGTACTTCTATCACCCAAGAGCATCAGAGGAGCGAGTTCCTCTATCATCTGATCATGGTTCTACCTCTGCTTTCTCCAGAGGGCTCCTAGTTGATACTAATCTTGAAACTTCAAGTCCTGACACTTATAGACCGCCTCCTGCTCCTGTTCCTTACAGCAGCGTTACTTTGGTTGTCACTCAGACTCCATCCAGGGTTAATGAAATTAGTGATAATAAGACTAATGCATCCCTTCAATCTACAAATCCTAATTCAATTCAAGAGACAGTTACTAGTGATGGTCATGGAAATTTGACCAAGTTGGAAGAGCAGAAGGAACTAGAGGGTAAAGTTCAAAGTGATTTAGAATTAGACTCAGCTAAGAACTCAGAAATTGAACTTCAAAAGCTAGAAGAACCTGTCATTTTAGCTGAAGAAGAGGATGTATGTCCTATCTGTTTGGAAGAGTATGATGCCGAGAATCCAAAACTCAGCACAAAATGTGATCATCATTTTCACCTTGCATGCATTCTAGAATGGATGGAAAGAAGTGAAAGCTGTCCCGTGTGTGATAAGGATATGGTTTTCGAGCCTCCAATTGATTAA 645 0.4124 MGGCCCCCCSSKETELSDPPAYFYHPRASEERVPLSSDHGSTSAFSRGLLVDTNLETSSPDTYRPPPAPVPYSSVTLVVTQTPSRVNEISDNKTNASLQSTNPNSIQETVTSDGHGNLTKLEEQKELEGKVQSDLELDSAKNSEIELQKLEEPVILAEEEDVCPICLEEYDAENPKLSTKCDHHFHLACILEWMERSESCPVCDKDMVFEPPID 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g1379 214 SUPERFAMILY RING/U-box 156 210 - -
Mibi12g1379 214 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE 40 210 - -
Mibi12g1379 214 ProSiteProfiles Zinc finger RING-type profile. 163 204 IPR001841 -
Mibi12g1379 214 MobiDBLite consensus disorder prediction 88 116 - -
Mibi12g1379 214 Pfam Ring finger domain 162 203 IPR001841 -
Mibi12g1379 214 SMART ring_2 163 203 IPR001841 -
Mibi12g1379 214 FunFam Putative E3 ubiquitin-protein ligase RHB1A 140 208 - -
Mibi12g1379 214 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 137 209 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g1379 Mibi-ChrMibi12 29475486 29477814 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g1379 1 214 C3H Transcription Factor Family AT5G41350 53.456 5.47e-68 206