Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g1374 ATGTCTTCAAATGCCTACACTTTTGATTCTTCTTTTCTCAGACATTCGACTTCATCAGACATGGCTTCCTCGGATGCTGCTGGCGGCGGAGACCTTTTCTTCTCCGACCCTTTTTCTCTCCCTTTCTTCAATAACCCCAACGATATTGTTCTTCATCAGATTCCAAACAACCAACACTCACTATTGGATCATGAAACTTCCGCTTCTTCTTCTTCTATTGACCCATTTTCCTCTTCTTTCTTCTCCTTCTCCCCTCCAAGTACCCACCTGGAAAGTCTCAGCCTTTATCAGCAGCATCTTCATGGAACTGAGTTTGGGAATTTCTCTGCTTTGGATGATGGGTTCAAAGTAGTGAAGAGTGAAGACTCACAAATGGGTTCTGATTACAGTGGAAATCAGAACTTTGTTCCTCATAGTTACAATAATGGTTCTGAAAATGTACACAAGTCCATTCAAAGGAGTTACAGCAGTAACTGTTTTGATGGGAAGCCTGGTTTTTTCTTTCAACCCAATTATGATACTCTCATGGATTCCTCAAACTTTCATGTTCAAGCCATAAATTCTCCTGAAACCAATCAAGTAAGAAGGGCGTGCAGTACAGGGGACTTGCAGAACATGGAATCATCAACTCAGACCAACCAAAGGGAAGGGTCGTTTTTAGAGGAAGCAAACTTCAAAGTAGGCCGTTACAGTGCTGAAGAAAGGAAAGAGAAAATCTCTAAATACAGAGCCAAGAGAAGCCAGAGGAACTTCAACAAGACCATCAAGTATGCATGCCGGAAAACATTGGCTGATAATCGGCCACGTATACGTGGCAGATTTGCAAGAAACGACGACACATGCGAGAATTCCAAGGGTTCATCAAGTTCAACTAGAAATGAAGAAGACGATGAATTATGGTTGGAAGGAATGCATGAAGAAGAGGAGGAGATGATGACGTGGAGAATGATGAGAGGAGGACAATATGGAGATCCCCATCATAATCAGTTCCAATACCATAGCTTTTGA 1008 0.4216 MSSNAYTFDSSFLRHSTSSDMASSDAAGGGDLFFSDPFSLPFFNNPNDIVLHQIPNNQHSLLDHETSASSSSIDPFSSSFFSFSPPSTHLESLSLYQQHLHGTEFGNFSALDDGFKVVKSEDSQMGSDYSGNQNFVPHSYNNGSENVHKSIQRSYSSNCFDGKPGFFFQPNYDTLMDSSNFHVQAINSPETNQVRRACSTGDLQNMESSTQTNQREGSFLEEANFKVGRYSAEERKEKISKYRAKRSQRNFNKTIKYACRKTLADNRPRIRGRFARNDDTCENSKGSSSSTRNEEDDELWLEGMHEEEEEMMTWRMMRGGQYGDPHHNQFQYHSF 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g1374 335 MobiDBLite consensus disorder prediction 275 299 - -
Mibi12g1374 335 Pfam CCT motif 235 277 IPR010402 GO:0005515
Mibi12g1374 335 ProSiteProfiles CCT domain profile. 235 277 IPR010402 GO:0005515
Mibi12g1374 335 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 73 316 IPR045281 GO:0009909
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g1374 Mibi-ChrMibi12 29426734 29428193 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g1374 231 280 C2C2-CO-like Transcription Factor Family AT5G24930 52.000 5.39e-11 61.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mibi12g1374 CCT 5.5e-18 CL0281