Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g1368 ATGGGATTCCCAGTTGGCTACACAGACCTCACCTTCCCAAAAATATTTCTTCACATCCTTTCTCTTCTGGGTTTCATCCGAAAATTCATAACCATTCTCTTTCGCTACCTGGGTCTCCACGATTTTCTCGAACCCGACATTGTTTGGCCCAACCCAGTACCACAATTCCACTCTGTATCAGCGATGCTCATACGAGAAATCCTTCCGGTGGCCAAGTTTTCCGACCTGGTGGACCCGCCGGAAAGTTGCGCCGTTTGTCTCTACGAGTTCGAGGCGGACGATGAGATCAGACGGCTCACAAATTGTAGGCACATATATCACAGAGGATGTTTGGACCGTTGGATGGGTTATGATCAGAGGACTTGTCCCCTGTGTCGAACACCTTTTATTCCTCATGATATGCAAGCTGCTTTTAATGATAGACTCTGGGCTGCTTCTGGGATTCCTGAATTCTATGCTGATTCCGATGAATACCCTCATCTTTCTTCTTTTTAA 495 0.4667 MGFPVGYTDLTFPKIFLHILSLLGFIRKFITILFRYLGLHDFLEPDIVWPNPVPQFHSVSAMLIREILPVAKFSDLVDPPESCAVCLYEFEADDEIRRLTNCRHIYHRGCLDRWMGYDQRTCPLCRTPFIPHDMQAAFNDRLWAASGIPEFYADSDEYPHLSSF 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g1368 164 CDD RING-H2 83 126 - -
Mibi12g1368 164 PANTHER RING ZINC FINGER PROTEIN-RELATED 20 145 - -
Mibi12g1368 164 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 77 129 IPR013083 -
Mibi12g1368 164 SUPERFAMILY RING/U-box 63 132 - -
Mibi12g1368 164 ProSiteProfiles Zinc finger RING-type profile. 83 126 IPR001841 -
Mibi12g1368 164 SMART ring_2 83 125 IPR001841 -
Mibi12g1368 164 Pfam Ring finger domain 82 126 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g1368 Mibi-ChrMibi12 29303023 29303517 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g1368 1 147 C3H Transcription Factor Family AT1G63840 61.039 3.94e-63 190