Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g1356 ATGGGTCATCACTCATGCTGCAATCAACAGAAGGTGAAGAGAGGGCTATGGTCTCCTGAGGAAGATGAGAAACTCATCAGATATATTACCACTCATGGCTATGGCTGCTGGAGTGAAGTCCCTGAGAAAGCTGGACTGCAAAGGTGTGGGAAGAGTTGTAGGCTGAGATGGATTAATTATTTGAGGCCTGATATTAGAAGAGGCAGGTTCACTCCTGAAGAGGAGAAGTTAATTATCAGCCTTCATGGCGTCGTTGGCAACAGGTGGGCTCACATAGCAAGTCACTTGCCTGGAAGAACAGACAATGAGATAAAGAACTATTGGAACTCATGGATCAAAAAGAAAATAAGAAAGCCTTCTTCAGTTGTCTCTTCAACCACAACAAATACACAAAGCAGTATCAACGACCATCATCAAAATCACCACCACCACCACCAATATAACTTCAATAATCCCAGCCATTTAGACTTTACCACCCAAGACAATAATCTAACAACAAAACCACCACCACTTCACCATCATCAAGACACTACCACAATATTTTCTTCCACGTGCCCCTTATTTATGTTTGACACTAGTTCTTTAGATGCTTCTTCTGCAACAACACCAACCACCACAATACTGGACAACAACAACAATAATAACGCAAGAGTAGTACCAGAAATGTATGAAACATGGAATAATCTGAGCAGCCACCATCATAATCAGATTCAATCTTTTCCTCCTCCTCCTCCTCCATCAACGGCTTCTTTCACTGCGGCTTCAGGCATGGTGTCTTGTAATTATCTGCCACCATTGGTAGAGAATAATGTGGAAAGCATGGTGCCTAACATTCATGAGAGTATAGTTGATGAGGAGGGTGAAATGGCACTAGAGTGCTTGCAGAGGCATGGATTGAATGAGTGGGTGGTGGACACACAACAACAATGTTCCAACTTTATTTTCTGGGAAAATGTGGTGGATGGACAACTTGGTGGTGGTGAAGATATTGCAACAAATTCTTCTTCAAATTTGGCAGCTGCACTTTCTTCTTTCCCTTCCTCTTTATGA 1050 0.4238 MGHHSCCNQQKVKRGLWSPEEDEKLIRYITTHGYGCWSEVPEKAGLQRCGKSCRLRWINYLRPDIRRGRFTPEEEKLIISLHGVVGNRWAHIASHLPGRTDNEIKNYWNSWIKKKIRKPSSVVSSTTTNTQSSINDHHQNHHHHHQYNFNNPSHLDFTTQDNNLTTKPPPLHHHQDTTTIFSSTCPLFMFDTSSLDASSATTPTTTILDNNNNNNARVVPEMYETWNNLSSHHHNQIQSFPPPPPPSTASFTAASGMVSCNYLPPLVENNVESMVPNIHESIVDEEGEMALECLQRHGLNEWVVDTQQQCSNFIFWENVVDGQLGGGEDIATNSSSNLAAALSSFPSSL 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g1356 349 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Mibi12g1356 349 Gene3D - 6 66 - -
Mibi12g1356 349 MobiDBLite consensus disorder prediction 122 152 - -
Mibi12g1356 349 PANTHER MYB DOMAIN PROTEIN 55 1 245 - -
Mibi12g1356 349 CDD SANT 17 61 IPR001005 -
Mibi12g1356 349 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Mibi12g1356 349 Gene3D - 68 148 - -
Mibi12g1356 349 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Mibi12g1356 349 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Mibi12g1356 349 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Mibi12g1356 349 SMART sant 66 114 IPR001005 -
Mibi12g1356 349 SMART sant 13 63 IPR001005 -
Mibi12g1356 349 FunFam MYB transcription factor 6 66 - -
Mibi12g1356 349 FunFam Transcription factor MYB26 68 140 - -
Mibi12g1356 349 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Mibi12g1356 349 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Mibi12g1356 349 CDD SANT 69 112 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g1356 Mibi-ChrMibi12 29200818 29202745 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g1356 1 333 MYB Transcription Factor Family AT1G63910 49.861 1.18e-100 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mibi12g1356 Myb_DNA-binding 5.5e-15 CL0123