Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mibi12g1346 | ATGGATCAACTTGCGTGCTTCAATATGGACTGGGATTTGCAAGCTATTGTAAGAGGGTACACCGGTGAAGCCTTAGAAACAGAAACAAGCACCACGATCTTGGATATCACACATCCTAATCTTCCTCATTTCTGTTCTGAATTACAAGTTCATGGTGGTGGTGATCCTTTCTGTAGTGCTTTTCCGGAATTCTCAGACACCACCATGGTTCTTGATGAATTGGGAGATGTTTACAAGCCTTTCTCAACACAAACAATTATCACCACGGCTTCCGTACCCATCCCCAAAGAAGTTATCAAAGCATCGGAGAAAGTACAAGATTTGCATGAATCTCCAAGCAAAAGAATAAGCAAGAAGAACCAGAACAAGAGAATAGTGAAGAAGGTAAAAGAAGATGGACTATGTGATGCGTGGGCATGGCGTAAATATGGGCAGAAACCAATAAAGGGGTCACCATATCCAAGAAGCTACTACAGATGTAGCAGCTCAAAAGGATGTATGGCAAGGAAACAAGTAGAAAGGAGCCATTTGGACCCTCAAGTTTTCATAGTCACTTATACTGCAGAACACAGTGATCATCACCCACCTCGTTCCTCGCGCAACAAAACTAGGCTTTCTAATAATCTTCTTGTTCCACCTGAAACTACTCAACTCACTTCTTCTCCCTTGGAAGACTCCATTATTGAAGATGAACCAATTGTGTCCATTGGGTCAAAACAATGCTTGAACAGAGACCAAGATGCTAAAATTGGTGAGAGTATTGTCACGGGTGAAAATAATATGCTAACCAATGATGATTGGTTTCCTAGGATAGATGAGCTTGACGGACTTAGCCAAGAATTTGCATTAGATGGTTACCTTCATGGCCAATTCTAA | 876 | 0.4155 | MDQLACFNMDWDLQAIVRGYTGEALETETSTTILDITHPNLPHFCSELQVHGGGDPFCSAFPEFSDTTMVLDELGDVYKPFSTQTIITTASVPIPKEVIKASEKVQDLHESPSKRISKKNQNKRIVKKVKEDGLCDAWAWRKYGQKPIKGSPYPRSYYRCSSSKGCMARKQVERSHLDPQVFIVTYTAEHSDHHPPRSSRNKTRLSNNLLVPPETTQLTSSPLEDSIIEDEPIVSIGSKQCLNRDQDAKIGESIVTGENNMLTNDDWFPRIDELDGLSQEFALDGYLHGQF | 291 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mibi12g1346 | 291 | Pfam | WRKY DNA -binding domain | 136 | 191 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
| Mibi12g1346 | 291 | PANTHER | WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED | 93 | 217 | IPR044810 | GO:0003700 | |
| Mibi12g1346 | 291 | SUPERFAMILY | WRKY DNA-binding domain | 131 | 195 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
| Mibi12g1346 | 291 | Gene3D | WRKY domain | 118 | 188 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
| Mibi12g1346 | 291 | FunFam | WRKY transcription factor 22 | 118 | 188 | - | - | |
| Mibi12g1346 | 291 | SMART | WRKY_cls | 134 | 195 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
| Mibi12g1346 | 291 | ProSiteProfiles | WRKY domain profile. | 129 | 195 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mibi12g1346 | Mibi-ChrMibi12 | 29109008 | 29110265 | Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Mibi12g1346 | 1 | 287 | WRKY Transcription Factor Family | AT4G23550 | 39.385 | 7.71e-50 | 165 |
Transcription factors information