Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g1330 ATGGGCAATTGCAGTGGCCACCCTTCCTCCCATAACCAACTCACCTCCCCACCTCCCAATCCTTCCCTCTCCGTCCTCCCCCCAAATTCCGACCCCCCTCCGCCTCCGCAAGAACCGCCTCTCTCCTCCACCGTCGGCCGCGTCCTCCGCCGCCCCATGGAAGACGTCCGTACAACCTACACCTTCGGCCGCGAACTAGGTCGCGGCCAATTCGGCGTTACCTACCTAGTCACTCACAAAATCACCAAACAACAATTCGCCTGTAAATCAATCGCCACTCGCAAACTCGTTAATCGCGACGACATCGATGACATTCGCCGTGAGGTCCACATCATGCACCACCTCACTGGTCATCGCAACATTGTCGAGCTCAAGGGAGCTTATGAGGATCGCCATTCTGTCAATTTGGTCATGGAGATTTGTGCTGGTGGCGAGCTTTTTGATAGGATCATTGCTAAAGGACATTATTCTGAGCGTGCGGCTGCTAATTTGTGCCGCCAGATTGTTACTGTTGTTCATAGTTGTCATTCCATGGGTGTGTTTCATAGGGATTTGAAGCCTGAGAATTTCTTGTTCCTTAGTAAAGATGATAGGTCGCCTCTTAAGGCCACTGATTTTGGTCTCTCCGTTTTCTTCAAGCCAGGAGATGTATTTAGGGATCTTGTTGGGAGTGCATATTATGTTGCTCCTGAGGTGCTGCGTAAAAGTTATGGACCAGAAGCTGATATTTGGAGTGCCGGTGTTATATTATACATTCTGCTTAGTGGTGTCCCGCCTTTCTGGGCTGAAAATGAACAGGGAATCTTTGATGCTATTCTTCGTGGACATGTCGATTTTGTGTCTAAACCTTGGCCTTCTATATCAAGTAGCGCCAAAGATTTGGTAAGAAAGATGCTACGAGCTGACCCCAGAGAACGGCTATCAGCCGTTGATGTCCTTAATCATCCTTGGATGAGAGAAGATGGGGATGCATCTGATAAGCCTCTTGACATTGCTGTTTTGTCTAGAATGAAACAATTCCGAGCAATGAACAAACTAAAGAAAGTAGCTCTGAAGGTAATTGCAGAAAATCTTTCTGAAGAAGAAATCATTGGCTTGAAGGAGATGTTCAAATCAATGGACACAGATAACAGTGGAACTATAACTTTTGAAGAGTTGAAAGTTGGTCTCCCCCAATTGGGTAGTAAGCTTTCTGAGTCTGAAGTGAGACAGTTGATGGAAGCGGCTGACGTAGATGGAAATGGAGCCATTGATTATATTGAATTTATAACAGCTACAATGCACTTGAATAGAATGGAAAGAGAGGATCACCTTTACAAAGCATTTGAATATTTTGACAAGGACAGGAGCGGATATATCACTAAGGAAGAGTTGGAATATGCGCTGACGAAGCATAATATGGGTGATGAAAATACTATAAAGGAGATCATTGCTGAAGTTGATGCAGACAATGATGGAAGAATCAATTATGAAGAGTTTGTTGCCATGATGAGGAAGGGCAACCCAGAAACGGTGAACAACAGACGTCGCAAGTAA 1536 0.4551 MGNCSGHPSSHNQLTSPPPNPSLSVLPPNSDPPPPPQEPPLSSTVGRVLRRPMEDVRTTYTFGRELGRGQFGVTYLVTHKITKQQFACKSIATRKLVNRDDIDDIRREVHIMHHLTGHRNIVELKGAYEDRHSVNLVMEICAGGELFDRIIAKGHYSERAAANLCRQIVTVVHSCHSMGVFHRDLKPENFLFLSKDDRSPLKATDFGLSVFFKPGDVFRDLVGSAYYVAPEVLRKSYGPEADIWSAGVILYILLSGVPPFWAENEQGIFDAILRGHVDFVSKPWPSISSSAKDLVRKMLRADPRERLSAVDVLNHPWMREDGDASDKPLDIAVLSRMKQFRAMNKLKKVALKVIAENLSEEEIIGLKEMFKSMDTDNSGTITFEELKVGLPQLGSKLSESEVRQLMEAADVDGNGAIDYIEFITATMHLNRMEREDHLYKAFEYFDKDRSGYITKEELEYALTKHNMGDENTIKEIIAEVDADNDGRINYEEFVAMMRKGNPETVNNRRRK 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g1330 511 ProSitePatterns Protein kinases ATP-binding region signature. 66 89 IPR017441 GO:0005524
Mibi12g1330 511 Gene3D Phosphorylase Kinase; domain 1 62 145 - -
Mibi12g1330 511 Pfam EF-hand domain pair 436 498 IPR002048 GO:0005509
Mibi12g1330 511 Pfam EF-hand domain pair 366 426 IPR002048 GO:0005509
Mibi12g1330 511 Gene3D - 330 501 - -
Mibi12g1330 511 ProSitePatterns EF-hand calcium-binding domain. 481 493 IPR018247 -
Mibi12g1330 511 ProSitePatterns EF-hand calcium-binding domain. 446 458 IPR018247 -
Mibi12g1330 511 PANTHER SERINE/THREONINE-PROTEIN KINASE 55 493 - -
Mibi12g1330 511 FunFam Calcium-dependent protein kinase 1 326 501 - -
Mibi12g1330 511 SMART efh_1 365 393 IPR002048 GO:0005509
Mibi12g1330 511 SMART efh_1 401 429 IPR002048 GO:0005509
Mibi12g1330 511 SMART efh_1 437 465 IPR002048 GO:0005509
Mibi12g1330 511 SMART efh_1 472 500 IPR002048 GO:0005509
Mibi12g1330 511 ProSiteProfiles Protein kinase domain profile. 60 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi12g1330 511 ProSiteProfiles EF-hand calcium-binding domain profile. 361 396 IPR002048 GO:0005509
Mibi12g1330 511 FunFam Calcium-dependent protein kinase 1 62 145 - -
Mibi12g1330 511 MobiDBLite consensus disorder prediction 1 46 - -
Mibi12g1330 511 ProSiteProfiles EF-hand calcium-binding domain profile. 433 468 IPR002048 GO:0005509
Mibi12g1330 511 ProSiteProfiles EF-hand calcium-binding domain profile. 397 432 IPR002048 GO:0005509
Mibi12g1330 511 ProSitePatterns EF-hand calcium-binding domain. 374 386 IPR018247 -
Mibi12g1330 511 SMART serkin_6 60 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi12g1330 511 SUPERFAMILY EF-hand 357 498 IPR011992 -
Mibi12g1330 511 MobiDBLite consensus disorder prediction 1 19 - -
Mibi12g1330 511 ProSiteProfiles EF-hand calcium-binding domain profile. 469 503 IPR002048 GO:0005509
Mibi12g1330 511 CDD STKc_CAMK 60 317 - -
Mibi12g1330 511 MobiDBLite consensus disorder prediction 20 41 - -
Mibi12g1330 511 FunFam calcium-dependent protein kinase 1 146 325 - -
Mibi12g1330 511 Pfam Protein kinase domain 60 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi12g1330 511 ProSitePatterns EF-hand calcium-binding domain. 410 422 IPR018247 -
Mibi12g1330 511 Gene3D Transferase(Phosphotransferase) domain 1 146 329 - -
Mibi12g1330 511 SUPERFAMILY Protein kinase-like (PK-like) 33 340 IPR011009 -
Mibi12g1330 511 ProSitePatterns Serine/Threonine protein kinases active-site signature. 180 192 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g1330 Mibi-ChrMibi12 28898667 28903165 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g1330 46 510 EF-hand Containing Proteins AT4G23650 80.215 0.0 803
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Mibi12g1330 Pkinase 5.3e-72 CL0016