Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g1313 ATGGCATTTCTACACATTTTCTATTCAATTTGCCTACTGGATCTGATTCTTTGGCAAGGAAATGCAGAGCCTTTTGAAGATAAGCGAGCTTTGCTTGATTTTGTGAACCAGTTCTCTCATTCTCGCCCTCTAAATTGGGATGAGAACTCTTCTGTGTGTACTAACTGGACTGGAGTCACTTGTAATGAAGATAAGTCTCGAGTGATAGCTGTTCGACTTCCAGGAATTGGGTTTCATGGAGAAATTCCACCCAACACTATTAGCCGCCTCTCTGCACTGCAAATAGTGAGCCTCAGATCCAATTTTATCAGTGGGAGTTTCCCTTCTGAGTTTTCTGAGTTAAAAAACCTGTCTGTACTGTATCTTCAATTTAACAACCTTTCTGGTTCTTTACCTGATTTCTCAGTCTGGAAGAACCTTACCATTGTTAATTTGTCCAATAATGGTTTCAATGGTACTATTCCTTTCTCACTTTCTAATTTGACTGAGCTTGCTGGTTTGAATCTTGCAAACAACTCGCTTTCCGGTGGAATTCCTGATATTCAGTTGCCCAGATTGCAACAGCTGAATTTGTCTAACAACATGTTGAACGGCAGTGTGCCTAATTCTCTCCAGAGGTTTCCTATGTCAGCATTCTTAGGTAATAACATATCTTTTGGAAATTATCCTCACCTTTCTCCTGTGCTCCCTCCTTCTTCCAAACCATCTTCAAAATCCAGGAAACATGGAGGTCTTGGGGAAGCGGCACTACTAGGAATTTCGACTGCTGTTGGTGTGCTTGCTCTTTTAGCATTTTGTTTTCTGATGTTTGTGTGCTTTTCAAGAAGGAGGGACGAAGATGGGTTCTCTGGGAAGTTGCAGAAGGGAGGAATGTCTCCAGAGAAGGAAGTTTCAAGAAATCAAGATGCGAGTAATAAACTTGTTTTCTTTGAGGGATGTAACTATGCCTTTGACTTGGAGGATTTGCTAAGGGCTTCTGCTGAGGTACTGGGTAAAGGAACGTTTGGCACTGCATATAAAGCCATACTAGAGGATGCTTCCACAGTCGTAGTCAAGAGGCTGAAGGATGTAGCTGTTGGAAAAAGAGACTTTGAGCAGCACATGGAGATTGTGGGAAGTCTTAAACATGATAATGTGGTTGAACTGAAAGCATATTACTATTCCAAGGATGAGAAGTTGATGGTATATGATTATTACAGTCAGGGGAGTCTCTCTTCTTTATTGCATGGTAAAAGAGGAGAGGATAGGGTGGCTTTAGATTGGGATAGTCGGCTTAAAATAGCAATAGGTGCTGCAAGAGGGATTGCTCGTATCCACACAGAGAACGGCGGAAAGATGGTGCATGGAAACATCAAAGCATCAAATATCTTTGTCAACTCTAAGCAGTATGGTTGTGTGTCTGATCCTGGATTGGCCATGATAATGAGCTCACTTGCCCTCCCCATATCACGTGCTTCTGGCTACCGAGCACCCGAAGTTACAGACACCAGAAAAGCAGCACAGCCTTCAGATATTTACAGTTTTGGAGTGGTGTTACTGGAGCTTCTGACTGGGAAGTCCCCAATACTTACCACTGGTGGGGATGAGATTGTCCACTTGGTGAGGTGGGTCCATTCAGTGGTGCGAGAAGAGTGGACAGCCGAAGTGTTTGACCTGGAACTAATGAGATATCCAAATATAGAAGAAGAGATGGTCGAGATGTTACAGATAGCTATGGCATGTGTGGCAAGGATGCCAGATCAGAGACCCAAGATTTCTGACGTTGTAAAGATGATAGAAAATGTGAGACAACTTGATATGGAGAGTCGTCCACCACCACCACCACCTGAGAGCCAAGCTGAAAGTGCAACATCACCATCAGTGTTAGGTACTCTCATCCACTAA 1884 0.4321 MAFLHIFYSICLLDLILWQGNAEPFEDKRALLDFVNQFSHSRPLNWDENSSVCTNWTGVTCNEDKSRVIAVRLPGIGFHGEIPPNTISRLSALQIVSLRSNFISGSFPSEFSELKNLSVLYLQFNNLSGSLPDFSVWKNLTIVNLSNNGFNGTIPFSLSNLTELAGLNLANNSLSGGIPDIQLPRLQQLNLSNNMLNGSVPNSLQRFPMSAFLGNNISFGNYPHLSPVLPPSSKPSSKSRKHGGLGEAALLGISTAVGVLALLAFCFLMFVCFSRRRDEDGFSGKLQKGGMSPEKEVSRNQDASNKLVFFEGCNYAFDLEDLLRASAEVLGKGTFGTAYKAILEDASTVVVKRLKDVAVGKRDFEQHMEIVGSLKHDNVVELKAYYYSKDEKLMVYDYYSQGSLSSLLHGKRGEDRVALDWDSRLKIAIGAARGIARIHTENGGKMVHGNIKASNIFVNSKQYGCVSDPGLAMIMSSLALPISRASGYRAPEVTDTRKAAQPSDIYSFGVVLLELLTGKSPILTTGGDEIVHLVRWVHSVVREEWTAEVFDLELMRYPNIEEEMVEMLQIAMACVARMPDQRPKISDVVKMIENVRQLDMESRPPPPPPESQAESATSPSVLGTLIH 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g1313 627 ProSiteProfiles Protein kinase domain profile. 324 595 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi12g1313 627 Gene3D Transferase(Phosphotransferase) domain 1 399 603 - -
Mibi12g1313 627 MobiDBLite consensus disorder prediction 599 627 - -
Mibi12g1313 627 PANTHER OS05G0588300 PROTEIN 8 604 - -
Mibi12g1313 627 SUPERFAMILY L domain-like 39 207 - -
Mibi12g1313 627 Gene3D Ribonuclease Inhibitor 137 226 IPR032675 -
Mibi12g1313 627 Pfam Protein tyrosine and serine/threonine kinase 328 591 IPR001245 GO:0004672|GO:0006468
Mibi12g1313 627 Gene3D Ribonuclease Inhibitor 26 136 IPR032675 -
Mibi12g1313 627 FunFam pollen receptor-like kinase 1 293 398 - -
Mibi12g1313 627 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 399 605 - -
Mibi12g1313 627 SUPERFAMILY Protein kinase-like (PK-like) 328 618 IPR011009 -
Mibi12g1313 627 Gene3D Phosphorylase Kinase; domain 1 291 398 - -
Mibi12g1313 627 Pfam Leucine rich repeat N-terminal domain 26 62 IPR013210 -
Mibi12g1313 627 ProSitePatterns Protein kinases ATP-binding region signature. 330 361 IPR017441 GO:0005524
Mibi12g1313 627 FunFam Probable inactive receptor kinase RLK902 25 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g1313 Mibi-ChrMibi12 28710241 28713193 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g1313 16 620 Receptor kinase-like Gene Family AT4G23740 65.968 0.0 800
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Mibi12g1313 PK_Tyr_Ser-Thr 5.2e-34 CL0016