Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g1302 ATGGCTGAAATAATCGCAGAAGTGTCCTTCGATCAAGTCCCATCGAGGAAGCAGCGAAGCCGAAGAGCATTGAAGGACAAAAATCCCTCAACCAATGAAGTCAAATCCTTAACCAAGAAGCTTTCTGATACTTCAACACCACCGGTTCCTATGGAATCAGACGCTAAAAAGGAGAACAAAGCCAGCGTCTCTGAATCTCAACCCAAGAAGGGAAAAGCTGCCTCCAAGAAACAGGTGAAGCAATCATTTGACCAAGATTTGCAAGACTTGCAGGATATGCTTCAGAAAATGCGCCTTGAGAAGGAGAAGACTGAAGAGCTCTTGAAGGCCAAAGATGAGATTTTGAAGAAGAAGGAAGAAGAGCTTGATGAGCGTGGCCGTGAGCAGGAGAAGCTTCAGATGGAGTTGAAAAAATTGCAGAAGCTCAAGGAATTCAAACCCACCATGATTTTGCCTATGCTGAGAGACAAGGAGCAAGAAAAGGACAAGAAGAAGAAGAATGGATGTATTGTGAAAAGGCCTTCTGCACCTTACATTTTGTGGAGCAAAGATCAATGGGCTGAGATCAAGAAGGCGAATCCAGAGGCTGAATTCAAGGACATTTCGAACATGTTAGGGGCTAAATGGAAGACCATAAGTGAAGAAGAGAAAATGCCTTATGAGGAGAAATATGTGATAGAGAAAGAAGCGTATCTGCGGGTAATGGCAAAGGAGAAACGTGAGACTGAGGCCATGAAGCTGTTAGAAGAGGAGCAAAAGCAGAAGACTGCCATGGAATTGCTCGAACAGTATATGCAGTTCAAACAAGAAACAGAGAAAGAAAGCAAGAAGAGCAGAAAAGAGAAGGATCCACTGAAACCAAAGCATCCTGTATCAGCTTTTATCTTGTACACGAATGATAGGCGTGCAGCTATTCTTGCGGAGAACAAGAGTATCCTGGAGGTTTCAAAGATTTCTGGTGAGGAGTGGAAAAACATGACAGAAGATCAGAAGAGACCTTATGAAGAGATGGCAAAGAAGAATAAGGAGAAGTATCTTCAAGAAATGGAGGCATACAAACAGAAGAAAGATGAGGAAACTGCGAATATCAGGAAGGAAGAGGAGGAGCAAATGAAAGTTCAGAAAGAAGAAGCCTTGAAACTACTGAAAAAGAAGGAGAAAACAGAGAATCTGATCAAGAAATCCAAGAAGAAGAAACAAAGCAAGGAAGACAAGAATTGTGATCCTAACAAGCCAAAGAGACCACCATCCTCGTTTCTGCTATTCAGCAAGGAAGCAAGGAAGAGCATACAAGAGGAAAGACCAGAGGTTAATAACTCTACACTGAGCGCAATGATATCAGTGAAATGGAAGGAACTAAGCGAGGAAGAGAGAAAAATGTGGAATGAAAAAGCAGCAGTGGCAATGGAGGCATACAAGAAGGAAATGGAGGAGTACCATAAATCGATAGCAGCGAAGTTGGACCAGAAAACAGAAGAATGA 1482 0.4251 MAEIIAEVSFDQVPSRKQRSRRALKDKNPSTNEVKSLTKKLSDTSTPPVPMESDAKKENKASVSESQPKKGKAASKKQVKQSFDQDLQDLQDMLQKMRLEKEKTEELLKAKDEILKKKEEELDERGREQEKLQMELKKLQKLKEFKPTMILPMLRDKEQEKDKKKKNGCIVKRPSAPYILWSKDQWAEIKKANPEAEFKDISNMLGAKWKTISEEEKMPYEEKYVIEKEAYLRVMAKEKRETEAMKLLEEEQKQKTAMELLEQYMQFKQETEKESKKSRKEKDPLKPKHPVSAFILYTNDRRAAILAENKSILEVSKISGEEWKNMTEDQKRPYEEMAKKNKEKYLQEMEAYKQKKDEETANIRKEEEEQMKVQKEEALKLLKKKEKTENLIKKSKKKKQSKEDKNCDPNKPKRPPSSFLLFSKEARKSIQEERPEVNNSTLSAMISVKWKELSEEERKMWNEKAAVAMEAYKKEMEEYHKSIAAKLDQKTEE 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g1302 493 MobiDBLite consensus disorder prediction 34 49 - -
Mibi12g1302 493 CDD HMGB-UBF_HMG-box 412 477 - -
Mibi12g1302 493 SUPERFAMILY HMG-box 274 359 IPR036910 -
Mibi12g1302 493 MobiDBLite consensus disorder prediction 268 289 - -
Mibi12g1302 493 Pfam HMG (high mobility group) box 171 236 IPR009071 -
Mibi12g1302 493 Pfam HMG (high mobility group) box 412 479 IPR009071 -
Mibi12g1302 493 Pfam HMG (high mobility group) box 287 353 IPR009071 -
Mibi12g1302 493 CDD HMGB-UBF_HMG-box 172 236 - -
Mibi12g1302 493 MobiDBLite consensus disorder prediction 1 86 - -
Mibi12g1302 493 Coils Coil 250 270 - -
Mibi12g1302 493 Gene3D High mobility group box domain 155 256 IPR036910 -
Mibi12g1302 493 Gene3D High mobility group box domain 392 491 IPR036910 -
Mibi12g1302 493 Gene3D High mobility group box domain 270 367 IPR036910 -
Mibi12g1302 493 ProSiteProfiles HMG boxes A and B DNA-binding domains profile. 287 353 IPR009071 -
Mibi12g1302 493 SMART hmgende2 170 240 IPR009071 -
Mibi12g1302 493 SMART hmgende2 286 354 IPR009071 -
Mibi12g1302 493 SMART hmgende2 411 481 IPR009071 -
Mibi12g1302 493 PANTHER HIGH MOBILITY GROUP B PROTEIN 13 6 489 IPR044601 GO:0003677
Mibi12g1302 493 ProSiteProfiles HMG boxes A and B DNA-binding domains profile. 171 239 IPR009071 -
Mibi12g1302 493 SUPERFAMILY HMG-box 408 483 IPR036910 -
Mibi12g1302 493 Coils Coil 335 405 - -
Mibi12g1302 493 MobiDBLite consensus disorder prediction 351 389 - -
Mibi12g1302 493 ProSiteProfiles HMG boxes A and B DNA-binding domains profile. 412 480 IPR009071 -
Mibi12g1302 493 MobiDBLite consensus disorder prediction 14 33 - -
Mibi12g1302 493 Coils Coil 80 142 - -
Mibi12g1302 493 SUPERFAMILY HMG-box 159 236 IPR036910 -
Mibi12g1302 493 MobiDBLite consensus disorder prediction 268 288 - -
Mibi12g1302 493 MobiDBLite consensus disorder prediction 351 420 - -
Mibi12g1302 493 CDD HMGB-UBF_HMG-box 287 350 - -
Mibi12g1302 493 Coils Coil 462 489 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR HMG Mibi12g1302 HMG_box 8.5e-18 CL0114
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi12g1302 12 28597237 28599178 Mibi12g1302 12 28597237 28599178 ECH