Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g1297 ATGGATGATCCTCCCCTAAAACAGTCAACATCTCAAGAAGTAAGCAATATGGAGTGGGAGTTTGTAAAGATGAGTGAGCAAGAGGAGGATCTCATCCACAGGATGTACAGGCTTGTCGGCAACAGGTGGGATTTGATAGCGGGACGCATTCCTGGTCGTAAGGCAGAAGAGATAGAGAGATTCTGGATCATGAAATACACTCAACCTTTCTCTCCTACTTCTAAGCATTATTCAACATCCCTAAAACCCTCCAAATAA 258 0.438 MDDPPLKQSTSQEVSNMEWEFVKMSEQEEDLIHRMYRLVGNRWDLIAGRIPGRKAEEIERFWIMKYTQPFSPTSKHYSTSLKPSK 85
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g1297 85 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 23 69 - -
Mibi12g1297 85 SUPERFAMILY Homeodomain-like 25 64 IPR009057 -
Mibi12g1297 85 Gene3D - 24 85 - -
Mibi12g1297 85 SMART sant 20 68 IPR001005 -
Mibi12g1297 85 FunFam MYB-like transcription factor 23 65 - -
Mibi12g1297 85 Pfam Myb-like DNA-binding domain 23 63 IPR001005 -
Mibi12g1297 85 CDD SANT 23 62 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g1297 Mibi-ChrMibi12 28554222 28555836 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g1297 24 62 MYB Transcription Factor Family AT5G52600 61.538 8.89e-13 58.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mibi12g1297 Myb_DNA-binding 5.7e-07 CL0123