Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g1288 ATGGAGGGATTTCAAGACACAAATTCTCAGCTTGAACCCCATAACGTTTCTGACATAGGATCATCTCTCTCAAATCTGATACTATCAGGTGGGACAAACCCCCTGGATTCCATTTTCTCTCACTGCCCTCAAACAAACACCACAAGCAATCCCATGTTCGAGGCTTTAGGCTCGTGTGGTTTTGAACCTCTTGGCTCGTCTGTTTATCTTCGCCAAAGAGACATTCTCCAGAAATTCTACGAAGATAACAGAGTGAGTAGCTCATTTTCTGGTGCATCTTCCATAAATCAACGTTTAAACCATGCAGGAGCAACTTCATACCCATACACGAATCCTTGTAAGAAAAAGCTGTACAGGGGAGTGAGACAGAGACATTGGGGGAAATGGGTTGCAGAAATTAGACTTCCTCAAAATAGAATGAGAGTTTGGTTAGGAACTTATGAAACTGCAGAAGCTGCTGCTTATGCTTATGATCGTGCCGCTTATAAGCTCAGAGGTGAATATGCTCGTTTGAATTTCCCAAATCTAAAGGACCCCAGTAAGTTAGGATTCGGAGATAGCTCCAGATTAAATGCTTTGAAAGCCTCTGTAGATGCTAAAATTCAAGCTATATGTCAGAAGGTGAAGAGGGAGAGAGCCAAGAAGAACAAAGCTAAGAAGCAGGCTAATCCCGTTCCTAGCCCAGAACAGAGTGAGAAGTCACAGAAGATTGAGTCTTCTTCTTGTTCATCATCGTCTTTACCTTTATCCCCGTTAGTTTTTGATGATAATTGGACAAACGAGTTCATTTCTCCGACGATTTCAGAAGATGGAGTATGGAAGGGTGATAACTCGCCTTCAACTGTTTCAACCGATTTTCCCATAATGGGAACAGAGGAAACAGAATTTGAAGATTGTTCCTTGGCAAGGTTGCCTTCCTTTGATCCTGAGTTAATTTGGGAAGTCCTTGCTAATTAA 957 0.4211 MEGFQDTNSQLEPHNVSDIGSSLSNLILSGGTNPLDSIFSHCPQTNTTSNPMFEALGSCGFEPLGSSVYLRQRDILQKFYEDNRVSSSFSGASSINQRLNHAGATSYPYTNPCKKKLYRGVRQRHWGKWVAEIRLPQNRMRVWLGTYETAEAAAYAYDRAAYKLRGEYARLNFPNLKDPSKLGFGDSSRLNALKASVDAKIQAICQKVKRERAKKNKAKKQANPVPSPEQSEKSQKIESSSCSSSSLPLSPLVFDDNWTNEFISPTISEDGVWKGDNSPSTVSTDFPIMGTEETEFEDCSLARLPSFDPELIWEVLAN 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g1288 318 Coils Coil 201 221 - -
Mibi12g1288 318 PRINTS Ethylene responsive element binding protein signature 118 129 IPR001471 GO:0003700|GO:0006355
Mibi12g1288 318 PRINTS Ethylene responsive element binding protein signature 140 156 IPR001471 GO:0003700|GO:0006355
Mibi12g1288 318 Gene3D AP2/ERF domain 117 175 IPR036955 GO:0003700|GO:0006355
Mibi12g1288 318 MobiDBLite consensus disorder prediction 223 247 - -
Mibi12g1288 318 SUPERFAMILY DNA-binding domain 117 174 IPR016177 GO:0003677
Mibi12g1288 318 FunFam Ethylene-responsive transcription factor 2 116 175 - -
Mibi12g1288 318 ProSiteProfiles AP2/ERF domain profile. 117 174 IPR001471 GO:0003700|GO:0006355
Mibi12g1288 318 CDD AP2 116 176 IPR001471 GO:0003700|GO:0006355
Mibi12g1288 318 Pfam AP2 domain 118 167 IPR001471 GO:0003700|GO:0006355
Mibi12g1288 318 MobiDBLite consensus disorder prediction 212 247 - -
Mibi12g1288 318 SMART rav1_2 117 180 IPR001471 GO:0003700|GO:0006355
Mibi12g1288 318 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 40 316 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g1288 Mibi-ChrMibi12 28509292 28510248 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g1288 16 318 AP2-EREBP Transcription Factor Family AT1G64380 47.493 1.53e-69 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mibi12g1288 AP2 4e-13 CL0081