Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g1253 ATGGGTGTCCCTGAAACTCAAACTCCATCCACATCTCTAAATCTGTATCCACAAGAACTTCAGTTAAAATTATACCAAGCCTTCATTTTCTCAATTCCAATCCTATTTTCCATCATTCTCTTTCTCTTGTTTTATTTGTTCTACCTCAAGCGTAGGGCTTCCTATCTCTCTTCCCCTCCTCACATTCTTCCCACCACTGCACCGTCAACTACCTATCATTCCACTGGGTTTCAATTGACAATTCAGTTCCTTGACACTCTTCCAAAAGTTTTATTTGATGAAGAATTGAAGGCAAGAGATTCACAATGTTGTGTATGTCTGGGAGAATTTGAGATAAAAGAAGAGGTATTACAAATCCCTCAGTGCAAGCATGTATTTCACAGAGATTGCATTTACCATTGGCTCTATACACACTCCACTTGTCCACTATGTAGATATTGTATCATCCCTCCCACCAAATTTTTGAATCCACCAATCCCCCATCCTCCTCCTCTTGCTGATGAAGCTGCTTCTGCTTATGTTTCCACTTCTTCCAGCCAAACAGAAAATAATGCATCTCATCTTTAA 567 0.3968 MGVPETQTPSTSLNLYPQELQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASYLSSPPHILPTTAPSTTYHSTGFQLTIQFLDTLPKVLFDEELKARDSQCCVCLGEFEIKEEVLQIPQCKHVFHRDCIYHWLYTHSTCPLCRYCIIPPTKFLNPPIPHPPPLADEAASAYVSTSSSQTENNASHL 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g1253 188 ProSiteProfiles Zinc finger RING-type profile. 103 145 IPR001841 -
Mibi12g1253 188 SUPERFAMILY RING/U-box 79 157 - -
Mibi12g1253 188 Pfam Ring finger domain 102 145 IPR001841 -
Mibi12g1253 188 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 69 150 IPR013083 -
Mibi12g1253 188 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 18 155 - -
Mibi12g1253 188 SMART ring_2 103 144 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g1253 Mibi-ChrMibi12 28131152 28132478 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g1253 3 150 C3H Transcription Factor Family AT4G10150 41.447 1.69e-35 122