Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g1245 ATGCATTCGAAATTGAAGTTGCCATTTTACGCCGTGGATGCATCACATTCATATTCACATTACAGAGAAATCCTCGAACCGCCTGTGAAGATGACAGAAGTGGCGAGCTCGGTGGTGCACGAGGTTCTGGGACGACGAGTTCAGGAAGTGGATCAGCCTATTATTGATTACATCATCAACGTCCTCGCTGATGATGACTTTGATTTTGGTGAAGATGGTGAAGGCGTCTACGATTTTCTCGGCGAGCTTTTCATTAGTGCCGACTGCGTCGACGACGACTCTGAGTGTCGCACTGTGTGTAGCAAATTGTCTGAGAAATTTGGAAAGCATGGGTTGGTCAAAGCTAAACCAACCGTGCGAAGCCTTTTAGCACCCGTCAGAATGAATGACGGAATGGATGATGGGGTAGCTCCTAAGAAGAAGCGTGAGCCTACTGACGGTCCTTTGCTAACTGAACGTGACCGTGTAAAGCTGGAAAGAAGGAAGAGGAAGGATGAACGCCAAAGGGAGGCACAGTACCAAATGCATCTAGCAGAAATGGAAGCAGCCCGAGAAGGGATGCCTGTTGTATGTGTTAGGCATGATAATAGTGGTGGATCAGTTGTCAAGGACATTCACATGGAGAACTTCAATATTTCTGTTGGAGGCCGTGATCTCATTGAGGATGGTTCAATCACACTCTCATTTGGAAGGCATTATGGCCTTATTGGAAGAAATGGTACTGGGAAAACAACATTCCTCAGGCATATGGCTATGCATGCCATTGATGGTATACCATATAATTGTCAGATATTGCATGTGGAACAAGAGGTAGTTGGTGACAATATAACAGCCTTGCAGTGTGTTCTCAATTCGGATATTGAGAGAACTCAACTTCTAGAGGAAGAAGCTCGATTACTTGCCCAACAGAGAGAGTTGGAGTCTGGGGATGTAACTGTAAAGGGAAGTGATGCCATTTCACAGAGACTTGAGGAAATCTACAAGAGGCTTGAGTTTATTGATGCTTACTCTGCTGAGTCACGTGCAGCTTCAATACTTGCTGGCCTAAGCTTCTCTCCTGAGATGCAAAAGAGGGCTACAAAAACTTTCTCTGGTGGATGGCGGATGCGGATAGCCCTTGCCCGTGCACTATTTATAGAACCTGACTTGTTGCTTCTTGATGAACCTACGAACCATCTTGATCTTCATGCTGTCTTATGGTTGGAATCATACTTGGTTAAGTGGCCAAAGACGTTCATAGTTGTTTCTCATGCCAGAGAATTTTTGAACACGGTGGTGACTGATATAATTCACCTACAAGCTAAGAAGTTGACTACTTATAAAGGGAATTATGATACTTTTGAGAAGACTCGAGAAGAACAGCTTAAAAACCAGCAAAAAGCTGTTGAGGCTAATGAACGCACAAGGGCTCATATGCAGTCTTTCATTGACAAGTTCCGTTATAATGCCAAGAGGGCATCGCTTGTTCAATCAAGAATCAAGGCTTTGGACCGGTTGGGTCGTGTGGATGAAATTATCAATGATCCTGACTACAAATTTGAGTTCCCAACTCCGGATGATAGACCTGGCGCACCAATAATAAGTTTTAGTGATGCATCTTTTGGATACCCAGGGGGCCCAATTCTATTCAAGAATTTGAATTTTGGGATTGATCTTGATAGCCGTATTGCAATGGTTGGACCCAACGGTATTGGCAAATCTACCATTCTTAAGTTAATTGCAGGGGAACTACAACCCACTTCTGGGACAGTTTTCCGTTCTGCAAAGGTTCGTATAGCAGTCTTCAGTCAGCATCACGTTGATGGACTAGACTTATCGTCAAATCCCCTTTTGTATATGATGCGCTGCTATCCTGGTGTTCCTGAACAGAAGCTTCGAGCTCACTTGGGCTCTTTTGGTGTAACTGGAAATCTTGCACTTCAGCCGATGTATACACTGTCAGGGGGACAAAAAAGCAGGGTTGCATTTGCAAAAATAACGTTCAAGAAACCACATATAATATTGCTTGATGAACCTTCCAATCACCTGGACTTGGATGCGGTTGAGGCGCTCATTCAAGGTCTTGTAATGTTCCAAGGAGGCATTTTAATGGTGAGTCACGATGAGCACCTTATATCTGGAAGTGTGGAGGAGCTTTGGGTTGTGTCCGAAGGAAGAGTGAATCCATTCCATGGCACCTTCCAAGATTATAAGAAGAGACTCCAGTCAGCGTAG 2214 0.4435 MHSKLKLPFYAVDASHSYSHYREILEPPVKMTEVASSVVHEVLGRRVQEVDQPIIDYIINVLADDDFDFGEDGEGVYDFLGELFISADCVDDDSECRTVCSKLSEKFGKHGLVKAKPTVRSLLAPVRMNDGMDDGVAPKKKREPTDGPLLTERDRVKLERRKRKDERQREAQYQMHLAEMEAAREGMPVVCVRHDNSGGSVVKDIHMENFNISVGGRDLIEDGSITLSFGRHYGLIGRNGTGKTTFLRHMAMHAIDGIPYNCQILHVEQEVVGDNITALQCVLNSDIERTQLLEEEARLLAQQRELESGDVTVKGSDAISQRLEEIYKRLEFIDAYSAESRAASILAGLSFSPEMQKRATKTFSGGWRMRIALARALFIEPDLLLLDEPTNHLDLHAVLWLESYLVKWPKTFIVVSHAREFLNTVVTDIIHLQAKKLTTYKGNYDTFEKTREEQLKNQQKAVEANERTRAHMQSFIDKFRYNAKRASLVQSRIKALDRLGRVDEIINDPDYKFEFPTPDDRPGAPIISFSDASFGYPGGPILFKNLNFGIDLDSRIAMVGPNGIGKSTILKLIAGELQPTSGTVFRSAKVRIAVFSQHHVDGLDLSSNPLLYMMRCYPGVPEQKLRAHLGSFGVTGNLALQPMYTLSGGQKSRVAFAKITFKKPHIILLDEPSNHLDLDAVEALIQGLVMFQGGILMVSHDEHLISGSVEELWVVSEGRVNPFHGTFQDYKKRLQSA 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g1245 737 Gene3D - 158 472 IPR027417 -
Mibi12g1245 737 Gene3D - 490 737 IPR027417 -
Mibi12g1245 737 ProSitePatterns ABC transporters family signature. 646 660 IPR017871 GO:0005524|GO:0016887
Mibi12g1245 737 Pfam ABC transporter 223 391 IPR003439 GO:0005524
Mibi12g1245 737 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 207 445 IPR027417 -
Mibi12g1245 737 Pfam ABC transporter 544 674 IPR003439 GO:0005524
Mibi12g1245 737 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 205 459 IPR003439 GO:0005524
Mibi12g1245 737 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 527 737 IPR003439 GO:0005524
Mibi12g1245 737 FunFam ATP-binding cassette sub-family F member 3 489 737 - -
Mibi12g1245 737 CDD ABCF_EF-3 205 436 - -
Mibi12g1245 737 SMART AAA_5 552 719 IPR003593 -
Mibi12g1245 737 SMART AAA_5 229 436 IPR003593 -
Mibi12g1245 737 CDD ABCF_EF-3 527 719 - -
Mibi12g1245 737 PANTHER ATP-BINDING TRANSPORT PROTEIN-RELATED 188 736 - -
Mibi12g1245 737 MobiDBLite consensus disorder prediction 130 149 - -
Mibi12g1245 737 ProSitePatterns ABC transporters family signature. 363 377 IPR017871 GO:0005524|GO:0016887
Mibi12g1245 737 MobiDBLite consensus disorder prediction 133 149 - -
Mibi12g1245 737 Pfam ABC transporter 430 510 IPR032781 -
Mibi12g1245 737 FunFam ABC transporter F family member 3 157 472 - -
Mibi12g1245 737 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 509 728 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g1245 Mibi-ChrMibi12 28028808 28038035 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g1245 484 688 Calmodulin-binding Proteins AT2G36910 26.160 4.04e-10 61.6