Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g1243 ATGTCTGCTTCTCGCATCTCAGGTTTGCCCCCAACAATGGCAGATTTTCTATTCTTTTTCGACATAAAAAAATGTCATCTTCTTCTTCTACTATGTTCACTAACAATCGTCGTCTTTGTAGCAGAATCTTCACCTGCTTGTTGTTTTGACTTAGACCTCGTGAAGCCCTCAATTCCACTTGTCACCTTCCTCGAACGTGTTCAAGAAACTGCTTTAGCTACTTTGGGAAAATCTGAATTCGATCCTAAAACATATGTGGACTTATCTTTGAAGTTCAGTTTGTCTGAGACAGAGGAGGCATTTGATAAGCTTCATAGGTCTTCTAATGGCTCTGTTCAAGCTGATGATTTGAATGGTTTTATAGAAAGATACTTTGATGGTGCAGGGGATGATGTGGTGTACCATGAACCAGAGGATTATGTAGAAGAGCCTGAGGGATTTTTGCCTAAAGTTGAGCATCCTGAGGTGAGGGCATGGGCTTTGAAGGTCCATTCCCTTTGGAAAAACTTGAGTAGAAGAGTATCATATGGGGTCAAAAGTAATCCCCATTTGCATACTCTTCTTCCTCTTCCTGATCCTTTCATCATTCCTGGTTCTCGATTTCATGAGGTTTATTACTGGGATTCCTACTGGGTGATCAGGGGCTTACTGGTGAGTAAAATGTACAAGACAGCCACGTCAATCGTGACTAATCTTATTTCTTTAATAGAGGAATATGGGTTTGTGCCTAATGGTGCAAGAGCCTACTACACCAACAGAAGCGAGCCTCCCCTTTTAAGTTCTATGATTTACGAGATTTACAATGGCACTGGTGATATAGAATTGGTCAAAAGATCACTTCCTGCGCTATTGAAAGAATATGAATTTTGGAATTCAGACATACATAGGGTGACCATTAAGGATGATCAAGGTTGCACCCACACCTTAAATCGTTATTATGCAATGTGGAATGAACCTAGGCCAGAATCTTCAACACAGGACAAGGCATTCGCTTCCAAGCTTTTGAATGTTTCAGAAAAACAGCACTTTTACCGTGAAGTGGCTTCAACTGCTGAATCAGGATGGGATTTTAGTACAAGATGGATGAGAGATCCATCAGATTTTACCACATTGGCTACAACAGCAGTAATACCTGTTGATCTAAATGCCTATATACTTGGGATGGAACTTAATATTGCATTTTTAGCTGAAGCTACCGGAGATAATAATACTGCTCAGCACTTCCTGAAACTAGCTGAGTATAGGAAGAAGGCGTTCAGTTCAGTTTTTTGGAACAAAAGCATGAAACAATGGCTTGATTACTGGCTCACTAGTAGTACATGTGAGGAAGCTCAAGTTTGGGATGCTAACCGGCAGAATCATAATGTATTTGCTTCCAATTTTGTTCCTTTGTGGATGGAACCGTTTTACTCAGAATCCTCGGTTGTGAGTGGCGTTGTTGAAAGCCTCAAAACTAGTGGGTTGCTTCGTGCTGCTGGAATTGCAACCTCTTTGAAGAATTCTGGACAACAGTGGGATTTCCCAAATGGTTGGGCCCCACTTCAACATATGATAGTAGAAGGTCTGGTGAAATCTGGGCTGAAAGAAGCAACTTCATTAGCAGAAGAAATTGCAAGGAGATGGATCACAACCAACTATATTGCCTTTAAGAAATCGGGGGTGATGCATGAAAAATATAATGTGGAGCATTGTGGTGATATTGGAGGTGGTGGTGAATATGTACCTCAGACTGGTTTTGGATGGTCAAATGGAGTGGTACTTGCTTTTTTGGAGGAGTTTGGATGGCCTCGAGATCTCAATATTAACTGCTAA 1812 0.4111 MSASRISGLPPTMADFLFFFDIKKCHLLLLLCSLTIVVFVAESSPACCFDLDLVKPSIPLVTFLERVQETALATLGKSEFDPKTYVDLSLKFSLSETEEAFDKLHRSSNGSVQADDLNGFIERYFDGAGDDVVYHEPEDYVEEPEGFLPKVEHPEVRAWALKVHSLWKNLSRRVSYGVKSNPHLHTLLPLPDPFIIPGSRFHEVYYWDSYWVIRGLLVSKMYKTATSIVTNLISLIEEYGFVPNGARAYYTNRSEPPLLSSMIYEIYNGTGDIELVKRSLPALLKEYEFWNSDIHRVTIKDDQGCTHTLNRYYAMWNEPRPESSTQDKAFASKLLNVSEKQHFYREVASTAESGWDFSTRWMRDPSDFTTLATTAVIPVDLNAYILGMELNIAFLAEATGDNNTAQHFLKLAEYRKKAFSSVFWNKSMKQWLDYWLTSSTCEEAQVWDANRQNHNVFASNFVPLWMEPFYSESSVVSGVVESLKTSGLLRAAGIATSLKNSGQQWDFPNGWAPLQHMIVEGLVKSGLKEATSLAEEIARRWITTNYIAFKKSGVMHEKYNVEHCGDIGGGGEYVPQTGFGWSNGVVLAFLEEFGWPRDLNINC 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g1243 603 Pfam Trehalase 80 594 IPR001661 GO:0004555|GO:0005991
Mibi12g1243 603 Gene3D - 62 599 IPR012341 GO:0005975
Mibi12g1243 603 PRINTS Glycosyl hydrolase family 37 signature 344 361 IPR001661 GO:0004555|GO:0005991
Mibi12g1243 603 PRINTS Glycosyl hydrolase family 37 signature 577 590 IPR001661 GO:0004555|GO:0005991
Mibi12g1243 603 PRINTS Glycosyl hydrolase family 37 signature 376 393 IPR001661 GO:0004555|GO:0005991
Mibi12g1243 603 PRINTS Glycosyl hydrolase family 37 signature 239 257 IPR001661 GO:0004555|GO:0005991
Mibi12g1243 603 PRINTS Glycosyl hydrolase family 37 signature 309 326 IPR001661 GO:0004555|GO:0005991
Mibi12g1243 603 PRINTS Glycosyl hydrolase family 37 signature 419 435 IPR001661 GO:0004555|GO:0005991
Mibi12g1243 603 PRINTS Glycosyl hydrolase family 37 signature 497 513 IPR001661 GO:0004555|GO:0005991
Mibi12g1243 603 ProSitePatterns Trehalase signature 2. 504 513 IPR018232 GO:0004555|GO:0005991
Mibi12g1243 603 PANTHER TREHALASE 57 599 IPR001661 GO:0004555|GO:0005991
Mibi12g1243 603 SUPERFAMILY Six-hairpin glycosidases 75 596 IPR008928 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g1243 Mibi-ChrMibi12 28014748 28019039 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g1243 54 603 Trehalose Biosynthesis Gene Families AT4G24040 59.928 0.0 675